RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SLC31A2O15432 143 aa15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 SPCS3P61009 180 aa15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 FAM27E3Q08E93 113 aa15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 PDLIM3Q53GG5 364 aaPredicted RBP15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 SSX9Q7RTT3 188 aa15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 OR52E5Q8NH55 327 aa15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 GCM1Q9NP62 436 aa15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 SPENQ96T58 3664 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-209ENST00000456560 PHOX2AO14813 284 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 IGHV1-46P01743 117 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 IGHV3-7P01780 117 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 SSTP61278 116 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 PRAMEF5Q5TYX0 476 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 WDR25Q64LD2 544 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 REC114Q7Z4M0 266 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 Q8N7P7 452 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 CTDSP1Q9GZU7 261 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 SLC25A22Q9H936 323 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 PITPNC1Q9UKF7 332 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 A0A1B0GV90 55 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 KIR2DS2P43631 304 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 VDAC2P45880 294 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 RELBQ01201 579 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 STUMQ69YW2 141 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 OR4A16Q8NH70 328 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 ACTR3CQ9C0K3 210 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 IL19Q9UHD0 177 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 WDR83OSQ9Y284 106 aa15.17■□□□□ 0.02
SEMA3B-209ENST00000456560 DSCAMO60469 2012 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 A0A087X0M5 115 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 A0A1B0GX30 115 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 CD40P25942 277 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 RAB7AP51149 207 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 TNFAIP6P98066 277 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 CT45A1Q5HYN5 189 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 DUX4L9Q6RFH8 374 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 OR10A7Q8NGE5 316 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 CT45A3Q8NHU0 189 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 S1PR3Q99500 378 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 FAM234AQ9H0X4 552 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 HCFC1P51610 2035 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 KBTBD11-OT1A0A1B0GTJ5 212 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 IFNA10P01566 189 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 MEF2BQ02080 365 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 UNQ6494/PRO21346Q6UXR6 183 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 VKORC1L1Q8N0U8 176 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 ZNF709Q8N972 641 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 OR4X1Q8NH49 305 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 DIRC2Q96SL1 478 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 RAB9BQ9NP90 201 aa15.16■□□□□ 0.02
SEMA3B-209ENST00000456560 TRAV3A0A0B4J244 114 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 C17orf112F2Z3M2 114 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 HMGB3O15347 200 aaKnown RBP15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 SELENOVP59797 346 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 TLE1Q04724 770 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 ADIRFQ15847 76 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 RAB24Q969Q5 203 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 GAFA1Q96PS6 74 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 IGF2RP11717 2491 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 NCOR2Q9Y618 2525 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 DSPP15924 2871 aaKnown RBP15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 ERVK-16P61578 105 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 TCF23Q7RTU1 214 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 TMEM183AQ8IXX5 376 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 OR5R1Q8NH85 324 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 LEAP2Q969E1 77 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 MSRB2Q9Y3D2 182 aa15.15■□□□□ 0.02
SEMA3B-209ENST00000456560 DSCAML1Q8TD84 2053 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 RNF224P0DH78 156 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 CD1BP29016 333 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 CCKARP32238 428 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 PSMB3P49720 205 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 RPP30P78346 268 aaKnown RBP15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 SMIM7Q9BQ49 75 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 TMEM140Q9NV12 185 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 NAT8Q9UHE5 227 aa15.14■□□□□ 0.01
SEMA3B-209ENST00000456560 PRSS46E5RG02 174 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 TMEM250H0YL14 139 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 BMP5P22003 454 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 ZNF439Q8NDP4 499 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 NUP37Q8NFH4 326 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 GATAD1Q8WUU5 269 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 SRD5A3Q9H8P0 318 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 MANBALQ9NQG1 85 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 ACOT6Q3I5F7 207 aaPredicted RBP15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 ZNF788Q6ZQV5 615 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 C16orf82Q7Z2V1 217 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 NECAP1Q8NC96 275 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 OR4S2Q8NH73 311 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 LINC00574Q9H8X3 128 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 ATMQ13315 3056 aa15.13■□□□□ 0.01
SEMA3B-209ENST00000456560 SAA2-SAA4A0A096LPE2 208 aa15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 TRGV10A0A0A0MS01 117 aa15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 RRHO14718 337 aa15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 SAA2P0DJI9 122 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 TMPRSS3P57727 454 aa15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 TMEM241Q24JQ0 296 aa15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 CYP2G1PQ6ZSU1 146 aa15.12■□□□□ 0.01
SEMA3B-209ENST00000456560 TMEM170AQ8WVE7 144 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms