RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 SFXN3Q9BWM7 321 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 TRAV24A0A0B4J272 114 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 SNURFLB1AK76 121 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 SMPD2O60906 423 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 BRI3O95415 125 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 IGLC1P0CG04 106 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 PMCHP20382 165 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 CAPZBP47756 277 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 FOXA3P55318 350 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 MORN2Q502X0 79 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 PRSS57Q6UWY2 283 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 TMEM136Q6ZRR5 245 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 FGFRL1Q8N441 504 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 OR5AU1Q8NGC0 362 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 OR1F12Q8NHA8 337 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 VAMP8Q9BV40 100 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 QTRT1Q9BXR0 403 aaKnown RBP3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 ZDHHC11Q9H8X9 412 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 TENM2Q9NT68 2774 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 A0A096LNJ9 63 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 C15orf62A8K5M9 175 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 PSPNO60542 156 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 IGHV3-13P01766 116 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 IGHV3-7P01780 117 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 LOXL1Q08397 574 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 MSMO1Q15800 293 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 SPEM1Q8N4L4 309 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 TPRX1Q8N7U7 411 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 OR1N2Q8NGR9 330 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 OR2Y1Q8NGV0 311 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 SF3B5Q9BWJ5 86 aaKnown RBP3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 MUC4Q99102 2169 aa3.76□□□□□ -1.81
DEPDC1-202ENST00000456315 NOTCH1P46531 2555 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 LINC00473A8K010 186 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 C11orf94C9JXX5 98 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 M0R135 149 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 CORTO00230 105 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 DKK1O94907 266 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 IGHV4-34P06331 123 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NPY1RP25929 384 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 LGALS4P56470 323 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 UBE2NP61088 152 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 BVES-AS1Q5T3Y7 98 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 PRAMEF20Q5VT98 475 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 C1orf189Q5VU69 101 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 DEFB125Q8N687 156 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ADPRHL1Q8NDY3 354 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 OR10P1Q8NGE3 313 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 OR52L2PQ8NGH6 319 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 OR5A2Q8NGI9 324 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF799Q96GE5 643 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 TXN2Q99757 166 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 CTDSP1Q9GZU7 261 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF430Q9H8G1 570 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NPVFQ9HCQ7 196 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 MRPL27Q9P0M9 148 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 LTBP2Q14767 1821 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 PRSS46E5RG02 174 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NTF3P20783 257 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 SRIP30626 198 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NSDHLQ15738 373 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF611Q8N823 705 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NHLRC2Q8NBF2 726 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NUDT10Q8NFP7 164 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 RNF138Q8WVD3 245 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 GNPNAT1Q96EK6 184 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 SFRP2Q96HF1 295 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 VPS25Q9BRG1 176 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 CLEC1BQ9P126 229 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 TRAV3A0A0B4J244 114 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 GGTLC3B5MD39 225 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF324O75467 553 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 HOXC12P31275 282 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 DAP3P51398 398 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 LCN2P80188 198 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 Q56UQ5 140 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF324BQ6AW86 544 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 MRPL54Q6P161 138 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 OSR2Q8N2R0 312 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 P2RX4Q99571 388 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 CFHR5Q9BXR6 569 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 NCR2O95944 276 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 MT-ATP6P00846 226 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 DTYMKP23919 212 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 CCKARP32238 428 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 CDC34P49427 236 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 RIPPLY2Q5TAB7 128 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 PARM1Q6UWI2 310 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 VKORC1L1Q8N0U8 176 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 BCL2L2Q92843 193 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 APOBEC3DQ96AK3 386 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 DGAT2Q96PD7 388 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 DCTN5Q9BTE1 182 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 ZNF391Q9UJN7 358 aa3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 UBE2J1Q9Y385 318 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-202ENST00000456315 TEX48A0A1B0GUV7 120 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 M0QZK8 103 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 Q0VG73 95 aa3.74□□□□□ -1.81
DEPDC1-202ENST00000456315 ALKBH6Q3KRA9 238 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms