RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
GTF2IRD1-203ENST00000455841 TLE4Q04727 773 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 CLEC12BQ2HXU8 276 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 OR4A47Q6IF82 309 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 MOB3BQ86TA1 216 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 ACTL6BO94805 426 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 REG1AP05451 166 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 GATA4P43694 442 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 AKR1D1P51857 326 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 GNB1P62873 340 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
GTF2IRD1-203ENST00000455841 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 CFHR2P36980 270 aa12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 OR10W1Q8NGF6 305 aa12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 LPAR2Q9HBW0 351 aa12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 AURKAIP1Q9NWT8 199 aaPredicted RBP12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 HSPB7Q9UBY9 170 aa12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 TCF19Q9Y242 345 aa12.52□□□□□ -0.4
GTF2IRD1-203ENST00000455841 MLANAQ16655 118 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 MLXQ9UH92 298 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 MAP1LC3B2A6NCE7 125 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 FCN3O75636 299 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RAB7AP51149 207 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 MAP1LC3BQ9GZQ8 125 aa12.52□□□□□ -0.41
GTF2IRD1-203ENST00000455841 A0A1W2PPE2 198 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ZNF727A8MUV8 499 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 WNT2P09544 360 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 GNLYP22749 145 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 PDLIM3Q53GG5 364 aaPredicted RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RPUSD4Q96CM3 377 aaKnown RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 WDR61Q9GZS3 305 aaKnown RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RPUSD1Q9UJJ7 312 aaKnown RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ZNF729A6NN14 1252 aaPredicted RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SRRM4A7MD48 611 aaKnown RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ARF6P62330 175 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
GTF2IRD1-203ENST00000455841 F2RL2O00254 374 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 GATA2P23769 480 aaPredicted RBP12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RTL8BQ17RB0 113 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 IGKV1D-33P01593 117 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 IGKV1-33P01594 117 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SLC25A6P12236 298 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SEC11CQ9BY50 192 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RAB5CP51148 216 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 OR10G4Q8NGN3 311 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 OR10G9Q8NGN4 311 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 OR10G7Q8NGN6 311 aa12.5□□□□□ -0.41
GTF2IRD1-203ENST00000455841 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 J3QR06 171 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SLC25A17O43808 307 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 APOA2P02652 100 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CT45A6P0DMU7 189 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CT45A5P0DMU8 189 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CT45A7P0DMV0 189 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ZNF672Q499Z4 452 aaPredicted RBP12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SPSB3Q6PJ21 355 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 C19orf35Q6ZS72 473 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SLC35B3Q9H1N7 401 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 JKAMPQ9P055 326 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 B9A039 149 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 MMP9P14780 707 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 HNF1AP20823 631 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 OR51B2Q9Y5P1 312 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 LINC00312Q9Y6C7 94 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 TRIM77I1YAP6 450 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SOD3P08294 240 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CELSR1Q9NYQ6 3014 aa12.49□□□□□ -0.41
GTF2IRD1-203ENST00000455841 C15orf62A8K5M9 175 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CD5P06127 495 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 LRRC75BQ2VPJ9 315 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 LHFPL4Q7Z7J7 247 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 FAM222BQ8WU58 562 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 COMMD5Q9GZQ3 224 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 A0A1W2PPV4 95 aa12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
GTF2IRD1-203ENST00000455841 CD1BP29016 333 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms