RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TMEM91Q6ZNR0 172 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 H1FOOQ8IZA3 346 aaPredicted RBP4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 C8orf59Q8N0T1 100 aaPredicted RBP4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR4A4PQ8NGN8 299 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FAM3DQ96BQ1 224 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RAB3CQ96E17 227 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ZNF414Q96IQ9 312 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FANCD2OSQ96PS1 177 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 URM1Q9BTM9 101 aaKnown RBP4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MND1Q9BWT6 205 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FKBP14Q9NWM8 211 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TAS2R8Q9NYW2 309 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FBXL17Q9UF56 701 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SPATA2Q9UM82 520 aa4.45□□□□□ -1.7
HLA-DPA3-207ENST00000454398 APOBP04114 4563 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 hCG_2014768A0A024R1R8 64 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGHV3-49A0A0A0MS15 119 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TRAV3A0A0B4J244 114 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CGB1A6NKQ9 187 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 A8MWP6 167 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 DENRO43583 198 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SPRY2O43597 315 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 AIREO43918 545 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 GGCTO75223 188 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 KBTBD11O94819 623 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGLV2-14P01704 120 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CDK1P06493 297 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 HIST1H1DP16402 221 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CRHBPP24387 322 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RPL27AP46776 148 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 NANOS2P60321 138 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MRPS15P82914 257 aaKnown RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FABP5Q01469 135 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SPHARQ15513 63 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TTC23Q5W5X9 447 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IZUMO2Q6UXV1 221 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 APRG1Q8IVJ8 170 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 FAM89BQ8N5H3 189 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 DHRSXQ8N5I4 330 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TEX45Q8NA69 505 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR56B1Q8NGI3 324 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR1L6Q8NGR2 347 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR5B3Q8NH48 314 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 NUDCD2Q8WVJ2 157 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TCTEX1D2Q8WW35 142 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 UFD1Q92890 307 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SPIN2AQ99865 258 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SPIN2BQ9BPZ2 258 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RIMS4Q9H426 269 aaPredicted RBP4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 HSF4Q9ULV5 492 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ZNF257Q9Y2Q1 563 aa4.44□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGKV3-7A0A075B6H7 116 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGHV3OR16-13A0A075B7E8 117 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGHV3-74A0A0B4J1X5 117 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TMEM235A6NFC5 223 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CCDC160A6NGH7 325 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR2T8A6NH00 312 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 LGALS9O00182 355 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CD1AP06126 327 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TFPI2P48307 235 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 SERPINB10P48595 397 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 BRWD1-AS2P59051 145 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ARFRP1Q13795 201 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 C2orf76Q3KRA6 126 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 NR2C2APQ86WQ0 139 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MMD2Q8IY49 270 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TTC9CQ8N5M4 171 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ZNF645Q8N7E2 425 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OSR1Q8TAX0 266 aaPredicted RBP4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 NRG4Q8WWG1 115 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 KCTD12Q96CX2 325 aaKnown RBP4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 C20orf24Q9BUV8 137 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RHBDL2Q9NX52 303 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MGAT4AQ9UM21 535 aa4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RBMX2Q9Y388 322 aaKnown RBP4.43□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGLV11-55A0A075B6I3 123 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IGLC7A0M8Q6 106 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 NPIPB5A8MRT5 1133 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CREBL2O60519 120 aaPredicted RBP4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CLEC3BP05452 202 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 ZNF735P0CB33 412 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 CD37P11049 281 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 DEFA4P12838 97 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 PSMB6P28072 239 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 BMI1P35226 326 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 APOC4P55056 127 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 IRF3Q14653 427 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 TIMM50Q3ZCQ8 353 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR4A47Q6IF82 309 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 RBPMS2Q6ZRY4 209 aaKnown RBP4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 MS4A15Q8N5U1 240 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 UBAC2Q8NBM4 344 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR10W1Q8NGF6 305 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR10R2Q8NGX6 335 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 OR4S2Q8NH73 311 aa4.42□□□□□ -1.7
HLA-DPA3-207ENST00000454398 GATAD1Q8WUU5 269 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms