RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SCAF4O95104 1147 aaKnown RBP9.65□□□□□ -0.86
VTA1-203ENST00000452973 SERF2P84101 59 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 ICAM4Q14773 271 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 FFAR4Q5NUL3 377 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 SLC25A48Q6ZT89 311 aaKnown RBP9.65□□□□□ -0.86
VTA1-203ENST00000452973 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
VTA1-203ENST00000452973 CLDND2Q8NHS1 167 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 PSMG3Q9BT73 122 aaPredicted RBP9.65□□□□□ -0.86
VTA1-203ENST00000452973 NCOR1P1Q9H4R4 102 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 TCF19Q9Y242 345 aa9.65□□□□□ -0.86
VTA1-203ENST00000452973 ITPR1Q14643 2758 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 MAP1LC3B2A6NCE7 125 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 BTBD17A6NE02 478 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 ARG1P05089 322 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 ADORA2A-AS1P86434 159 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 DIAPH2-AS1Q14236 149 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 SSX8Q7RTT4 187 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 OR13D1Q8NGV5 346 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 OR10X1Q8NGY0 326 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 CORO2AQ92828 525 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 LHX4Q969G2 390 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 MAP1LC3BQ9GZQ8 125 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 TMPRSS5Q9H3S3 457 aa9.65□□□□□ -0.87
VTA1-203ENST00000452973 HIVEP3Q5T1R4 2406 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 MED13LQ71F56 2210 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 COL8A2P25067 703 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 RAB11AP62491 216 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 AVPI1Q5T686 147 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
VTA1-203ENST00000452973 ST6GALNAC3Q8NDV1 305 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 NPCDR1Q9BY65 106 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
VTA1-203ENST00000452973 SRRM4A7MD48 611 aaKnown RBP9.64□□□□□ -0.87
VTA1-203ENST00000452973 B9A039 149 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 CD1BP29016 333 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 ATP6V1FQ16864 119 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 FAM122CQ6P4D5 195 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 OR10G4Q8NGN3 311 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 OR10G9Q8NGN4 311 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 OR10G7Q8NGN6 311 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 MLXQ9UH92 298 aa9.64□□□□□ -0.87
VTA1-203ENST00000452973 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
VTA1-203ENST00000452973 RTL8BQ17RB0 113 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 GCSAMLQ5JQS6 135 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 DPPA3Q6W0C5 159 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 HEPN1Q6WQI6 88 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 ENY2Q9NPA8 101 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 COL12A1Q99715 3063 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 HRASP01112 189 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.63□□□□□ -0.87
VTA1-203ENST00000452973 A0A1W2PPE2 198 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 C15orf61A6NNL5 157 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 ITGB1BP1O14713 200 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
VTA1-203ENST00000452973 SMCO4Q9NRQ5 59 aa9.63□□□□□ -0.87
VTA1-203ENST00000452973 ASH1LQ9NR48 2969 aaKnown RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 H3BQ15 152 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 LOXP28300 417 aaPredicted RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 GNB2P62879 340 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 ZNF429Q86V71 674 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 ADTRPQ96IZ2 230 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 OR51B2Q9Y5P1 312 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 PLXNB1O43157 2135 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 IGHV3-72A0A0B4J1Y9 119 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 VDAC2P45880 294 aaPredicted RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 RPP30P78346 268 aaKnown RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
VTA1-203ENST00000452973 PATZ1Q9HBE1 687 aaKnown RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 HRNRQ86YZ3 2850 aaPredicted RBP9.62□□□□□ -0.87
VTA1-203ENST00000452973 J3QR06 171 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 HSPE1P61604 102 aaKnown RBP9.61□□□□□ -0.87
VTA1-203ENST00000452973 TMEM170AQ8WVE7 144 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 SSMEM1Q8WWF3 244 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 HARBI1Q96MB7 349 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 LINC00574Q9H8X3 128 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 GAB2Q9UQC2 676 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 A0A1B0GW64 132 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 CRYBA1P05813 215 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 BCL2P10415 239 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 GATAD1Q8WUU5 269 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 FAM122AQ96E09 287 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 A0A1W2PPH5 198 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 FAM90A9PA6NNJ1 464 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 HSPB1P04792 205 aaKnown RBP9.61□□□□□ -0.87
VTA1-203ENST00000452973 SAA1P0DJI8 122 aaPredicted RBP9.61□□□□□ -0.87
VTA1-203ENST00000452973 KHDC3LQ587J8 217 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 FAM24BQ8N5W8 94 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 FAM216AQ8WUB2 273 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 RAB24Q969Q5 203 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 RAB39BQ96DA2 213 aa9.61□□□□□ -0.87
VTA1-203ENST00000452973 PKD1L2Q7Z442 2459 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms