RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 LTBRP36941 435 aa11.21□□□□□ -0.62
SMARCA4-205ENST00000450717 SPATA45Q537H7 98 aa11.21□□□□□ -0.62
SMARCA4-205ENST00000450717 C19orf54Q5BKX5 351 aa11.21□□□□□ -0.62
SMARCA4-205ENST00000450717 LAMTOR1Q6IAA8 161 aa11.21□□□□□ -0.62
SMARCA4-205ENST00000450717 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.62
SMARCA4-205ENST00000450717 LNP1A1A4G5 178 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 CCL1P22362 96 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 FAM53AQ6NSI3 398 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 VKORC1L1Q8N0U8 176 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 PGLYRP4Q96LB8 373 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 WDR25Q64LD2 544 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 CECR9P0C854 216 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 CA7P43166 264 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 CSRP2Q16527 193 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 SNRPCP09234 159 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 RCC1LQ96I51 464 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 MIEN1Q9BRT3 115 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 UNC13CQ8NB66 2214 aa11.2□□□□□ -0.62
SMARCA4-205ENST00000450717 A0A0B4J293 547 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 APOBEC3AP31941 199 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 FAM106AQ4KMX7 169 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 NYNRINQ9P2P1 1898 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 A8MXK9 166 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 UBE2L6O14933 153 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 EFEMP2O95967 443 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ANOS1P23352 680 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 BTCP35070 178 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ZNF385CQ66K41 422 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 MTCL1Q9Y4B5 1905 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 NR2C2APQ86WQ0 139 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 RPRMQ9NS64 109 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ZNF324O75467 553 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 UMODP07911 640 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 MPZP25189 248 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 FXYD3Q14802 87 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ARID1AO14497 2285 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 PRR19A6NJB7 356 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 CX3CL1P78423 397 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ZNF362Q5T0B9 420 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 ZNRF1Q8ND25 227 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
SMARCA4-205ENST00000450717 A0A0G2JMM0 328 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 A0A1W2PPB8 328 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 A0A1W2PRS3 328 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 KIR3DP1A8MWS1 328 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 TRGC1P0CF51 173 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 RRN3P1Q2M238 152 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 SLC25A28Q96A46 364 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 PIKFYVEQ9Y2I7 2098 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 ARF6P62330 175 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 MUC15Q8N387 334 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 TRAV14DV4A0A0A6YYC5 116 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 FOLR2P14207 255 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 TFPI2P48307 235 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 PNKDQ8N490 385 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 SRSF12Q8WXF0 261 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 EEF1AKMT3Q96AZ1 226 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 IFI27L2Q9H2X8 130 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 TMEM106BQ9NUM4 274 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 IGHV2OR16-5A0A0B4J2B6 119 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 REG1AP05451 166 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 COX6CP09669 75 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 SRIP30626 198 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 LINC00518Q8N0U6 118 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
SMARCA4-205ENST00000450717 NPIPB7O75200 414 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 LCN2P80188 198 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 MEF2CQ06413 473 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 DDB2Q92466 427 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 TSPOP30536 169 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 ERASQ7Z444 233 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 C18orf12Q96KH6 178 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 C9orf172C9J069 976 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 EIF3GO75821 320 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 PDLIM4P50479 330 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 KLRB1Q12918 225 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 HERPUD1Q15011 391 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
SMARCA4-205ENST00000450717 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms