RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 TUBA4BQ9H853 241 aa16.77■□□□□ 0.28
CPSF7-208ENST00000450000 HRASLSQ9HDD0 168 aa16.77■□□□□ 0.28
CPSF7-208ENST00000450000 PPYP01298 95 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 IGHV4-30-4P0DP06 118 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 DEFA4P12838 97 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 HERV-K104P61576 105 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 MSMO1Q15800 293 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 C15orf32Q32M92 178 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 SPAG16Q8N0X2 631 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 Q8N402 240 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 DYNLRB2Q8TF09 96 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 BORCS5Q969J3 196 aa16.76■□□□□ 0.27
CPSF7-208ENST00000450000 PTHLHP12272 177 aa16.75■□□□□ 0.27
CPSF7-208ENST00000450000 RPL8P62917 257 aaKnown RBP16.75■□□□□ 0.27
CPSF7-208ENST00000450000 KCTD12Q96CX2 325 aaKnown RBP16.75■□□□□ 0.27
CPSF7-208ENST00000450000 GPHA2Q96T91 129 aa16.75■□□□□ 0.27
CPSF7-208ENST00000450000 FBXL7Q9UJT9 491 aa16.75■□□□□ 0.27
CPSF7-208ENST00000450000 ADAM30Q9UKF2 790 aa16.75■□□□□ 0.27
CPSF7-208ENST00000450000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.74■□□□□ 0.27
CPSF7-208ENST00000450000 TRBV9A0A0B4J1U6 114 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 CSN3P07498 182 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 ZNF45Q02386 682 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 TMEM17Q86X19 198 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 PUSL1Q8N0Z8 303 aaKnown RBP16.74■□□□□ 0.27
CPSF7-208ENST00000450000 OR5AP2Q8NGF4 316 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 OR4A5Q8NH83 315 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 PALMDQ9NP74 551 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 SLC2A9Q9NRM0 540 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 SIGLEC8Q9NYZ4 499 aa16.74■□□□□ 0.27
CPSF7-208ENST00000450000 COL7A1Q02388 2944 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 A0A087WXM4 84 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 MEIS3P1A6NDR6 274 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 NPIPB5A8MRT5 1133 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 SULT1C2O00338 296 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 XRCC3O43542 346 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 GGCTO75223 188 aaKnown RBP16.73■□□□□ 0.27
CPSF7-208ENST00000450000 RBMXL2O75526 392 aaKnown RBP16.73■□□□□ 0.27
CPSF7-208ENST00000450000 HLA-GP17693 338 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 UBE2NLQ5JXB2 153 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 TMEM69Q5SWH9 247 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 AADACL3Q5VUY0 350 aa16.73■□□□□ 0.27
CPSF7-208ENST00000450000 BMPR1BO00238 502 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 HPRT1P00492 218 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 HIST1H1BP16401 226 aaKnown RBP16.72■□□□□ 0.27
CPSF7-208ENST00000450000 LSM3P62310 102 aaKnown RBP16.72■□□□□ 0.27
CPSF7-208ENST00000450000 EIF4EBP1Q13541 118 aaPredicted RBP16.72■□□□□ 0.27
CPSF7-208ENST00000450000 IL34Q6ZMJ4 242 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 Q8N1Y9 231 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 DMBX1Q8NFW5 382 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 OR2K2Q8NGT1 345 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 MUC7Q8TAX7 377 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 CD300LFQ8TDQ1 290 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 GIMAP1Q8WWP7 306 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 EEF1AKMT3Q96AZ1 226 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 BET1LQ9NYM9 111 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 EHFQ9NZC4 300 aa16.72■□□□□ 0.27
CPSF7-208ENST00000450000 TEX22C9J3V5 150 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 RBFOX2O43251 390 aaKnown RBP eCLIP16.71■□□□□ 0.274e-7■□□□□ 10.3
CPSF7-208ENST00000450000 IL6RP08887 468 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-208ENST00000450000 ZNF735P0CB33 412 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 NQO2P16083 231 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 PSMB6P28072 239 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 TAS2R31P59538 309 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 OR4A47Q6IF82 309 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 SAMD12Q8N8I0 201 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 TSPAN14Q8NG11 270 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 OR51H1Q8NH63 302 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 COMMD5Q9GZQ3 224 aa16.71■□□□□ 0.27
CPSF7-208ENST00000450000 PPP5D1E7EU14 171 aa16.7■□□□□ 0.26
CPSF7-208ENST00000450000 CYB5BO43169 146 aa16.7■□□□□ 0.26
CPSF7-208ENST00000450000 TNFAIP8O95379 198 aa16.7■□□□□ 0.26
CPSF7-208ENST00000450000 ERVK-16P61578 105 aa16.7■□□□□ 0.26
CPSF7-208ENST00000450000 OR5H2Q8NGV7 314 aa16.7■□□□□ 0.26
CPSF7-208ENST00000450000 SLC2A8Q9NY64 477 aa16.7■□□□□ 0.26
CPSF7-208ENST00000450000 A8MZ25 164 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 IGHV3-23P01764 117 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 ARL3P36405 182 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 RPS19P39019 145 aaKnown RBP16.69■□□□□ 0.26
CPSF7-208ENST00000450000 BRWD1-AS2P59051 145 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 TAS2R46P59540 309 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 FAM106AQ4KMX7 169 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 CLEC19AQ6UXS0 136 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 C19orf73Q9NVV2 129 aa16.69■□□□□ 0.26
CPSF7-208ENST00000450000 SMIM31A0A1B0GVY4 71 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 ZNF320A2RRD8 509 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 NDUFB8O95169 186 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 OR2C1O95371 312 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 IFNA6P05013 189 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 REG1AP05451 166 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 CRYGCP07315 174 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 AREGP15514 252 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 PRSS3P35030 304 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 TGFBR1P36897 503 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 ZNF818PQ6ZRF7 136 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 CMTM1Q8IZ96 169 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 CXorf58Q96LI9 332 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 SPATA25Q9BR10 227 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 ZNF2Q9BSG1 426 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-208ENST00000450000 THYN1Q9P016 225 aa16.68■□□□□ 0.26
CPSF7-208ENST00000450000 E7EUB6 86 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms