RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TMEM236Q5W0B7 351 aa5.51□□□□□ -1.53
LINC01961-201ENST00000449954 CEACAM19Q7Z692 300 aa5.51□□□□□ -1.53
LINC01961-201ENST00000449954 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.51□□□□□ -1.53
LINC01961-201ENST00000449954 FYTTD1Q96QD9 318 aaKnown RBP5.51□□□□□ -1.53
LINC01961-201ENST00000449954 RNF2Q99496 336 aa5.51□□□□□ -1.53
LINC01961-201ENST00000449954 NIPSNAP3BQ9BS92 247 aa5.51□□□□□ -1.53
LINC01961-201ENST00000449954 TMEM70Q9BUB7 260 aa5.51□□□□□ -1.53
LINC01961-201ENST00000449954 SRRM4A7MD48 611 aaKnown RBP5.5□□□□□ -1.53
LINC01961-201ENST00000449954 C15orf62A8K5M9 175 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 M0R1X1 148 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 NDUFA4O00483 81 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 PRKYO43930 277 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 REG1AP05451 166 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 HTR1AP08908 422 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 RRASP10301 218 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 HSD17B1P14061 328 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 HTN3P15516 51 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 RPA2P15927 270 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 GNRHRP30968 328 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 DEFB131AP59861 70 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 TP53I3Q53FA7 332 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 AADACL4Q5VUY2 407 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 LEMD1Q68G75 181 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 SSX9Q7RTT3 188 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 MMD2Q8IY49 270 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 OR10H4Q8NGA5 316 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 ZNF502Q8TBZ5 544 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 PTX4Q96A99 478 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 NEU1Q99519 415 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 C20orf24Q9BUV8 137 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 C1QTNF4Q9BXJ3 329 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 KRTAP1-5Q9BYS1 174 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 MAGIXQ9H6Y5 334 aa5.5□□□□□ -1.53
LINC01961-201ENST00000449954 ZNF430Q9H8G1 570 aaPredicted RBP5.5□□□□□ -1.53
LINC01961-201ENST00000449954 WARS2Q9UGM6 360 aaKnown RBP5.5□□□□□ -1.53
LINC01961-201ENST00000449954 PUS1Q9Y606 427 aaKnown RBP eCLIP5.5□□□□□ -1.53
LINC01961-201ENST00000449954 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 IGKV3-7A0A075B6H7 116 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 IGLV11-55A0A075B6I3 123 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 TRAV2A0A0B4J234 112 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 A0A1W2PP11 408 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 OR4C45A6NMZ5 311 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 TEX22C9J3V5 150 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 CRYGCP07315 174 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 DEFA4P12838 97 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 GNB3P16520 340 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 ZBTB25P24278 435 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 ZNF93P35789 620 aaPredicted RBP5.49□□□□□ -1.53
LINC01961-201ENST00000449954 DLK1P80370 383 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 TPBGQ13641 420 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 CDK10Q15131 360 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 USF2Q15853 346 aaPredicted RBP5.49□□□□□ -1.53
LINC01961-201ENST00000449954 C10orf55Q5SWW7 151 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 SPSB3Q6PJ21 355 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 IDO2Q6ZQW0 420 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 C19orf35Q6ZS72 473 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 MOB1BQ7L9L4 216 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 BSCL2Q96G97 398 aaPredicted RBP5.49□□□□□ -1.53
LINC01961-201ENST00000449954 C11orf54Q9H0W9 315 aaPredicted RBP5.49□□□□□ -1.53
LINC01961-201ENST00000449954 FNDC4Q9H6D8 234 aaPredicted RBP5.49□□□□□ -1.53
LINC01961-201ENST00000449954 Q9H8V8 135 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 ISG20L2Q9H9L3 353 aaKnown RBP5.49□□□□□ -1.53
LINC01961-201ENST00000449954 TMBIM4Q9HC24 238 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 CLEC5AQ9NY25 188 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 DKK2Q9UBU2 259 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 SMPXQ9UHP9 88 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
LINC01961-201ENST00000449954 IGHV7-4-1A0A0J9YVY3 117 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 SMIM9A6NGZ8 99 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 HMX3A6NHT5 357 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 CHEK1O14757 476 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 PDCD6O75340 191 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 GCSHP23434 173 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 PTBP1P26599 531 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC01961-201ENST00000449954 FUSP35637 526 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC01961-201ENST00000449954 SOX2P48431 317 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 ALDH3B2P48448 385 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 HAMPP81172 84 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 RNASE12Q5GAN4 147 aaKnown RBP5.48□□□□□ -1.53
LINC01961-201ENST00000449954 DDI2Q5TDH0 399 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 FAM90A2PQ658T7 463 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 GSG1LQ6UXU4 331 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 GBGT1Q8N5D6 347 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 OSR1Q8TAX0 266 aaPredicted RBP5.48□□□□□ -1.53
LINC01961-201ENST00000449954 DNAJC9Q8WXX5 260 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 ATP6V0BQ99437 205 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 THTPAQ9BU02 230 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 RHPN1-AS1Q9BWJ2 59 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 MAGT1Q9H0U3 335 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 TMEM138Q9NPI0 162 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 THYN1Q9P016 225 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 C11orf21Q9P2W6 132 aa5.48□□□□□ -1.53
LINC01961-201ENST00000449954 TMEM212A6NML5 194 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 DNASE2O00115 360 aaPredicted RBP5.47□□□□□ -1.53
LINC01961-201ENST00000449954 SAA1P0DJI8 122 aaPredicted RBP5.47□□□□□ -1.53
LINC01961-201ENST00000449954 ANXA8P13928 327 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 FGF9P31371 208 aaPredicted RBP5.47□□□□□ -1.53
LINC01961-201ENST00000449954 ATP6V1E1P36543 226 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 CEACAM6P40199 344 aa5.47□□□□□ -1.53
LINC01961-201ENST00000449954 EMP1P54849 157 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms