RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 LDLRAD2Q5SZI1 272 aa6.9□□□□□ -1.31
HCG18-238ENST00000449544 Q8NFD4 153 aa6.9□□□□□ -1.31
HCG18-238ENST00000449544 MRPS18AQ9NVS2 196 aaKnown RBP6.9□□□□□ -1.31
HCG18-238ENST00000449544 DOCK11Q5JSL3 2073 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 LRP4O75096 1905 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 GALP22466 123 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 DGCR2P98153 550 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 SSX1Q16384 188 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 C9orf66Q5T8R8 295 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 GGNBP1Q5YKI7 109 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 FGFRL1Q8N441 504 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 APH1BQ8WW43 257 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 DMRTB1Q96MA1 342 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 PLSCR3Q9NRY6 295 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 KLK11Q9UBX7 282 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 CCL24O00175 119 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 GGCTO75223 188 aaKnown RBP6.89□□□□□ -1.31
HCG18-238ENST00000449544 ELANEP08246 267 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 HLA-GP17693 338 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 CMC4P56277 68 aaPredicted RBP6.89□□□□□ -1.31
HCG18-238ENST00000449544 C1orf100Q5SVJ3 147 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 C11orf71Q6IPW1 123 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 LCN12Q6JVE5 192 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 IGKV1-9A0A0C4DH69 117 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 IFNA1P01562 189 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 ALDH3B2P48448 385 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 ZNF585BQ52M93 769 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 FAAP20Q6NZ36 180 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 RBPMSQ93062 196 aaKnown RBP6.89□□□□□ -1.31
HCG18-238ENST00000449544 ATG101Q9BSB4 218 aa6.89□□□□□ -1.31
HCG18-238ENST00000449544 TRAV30A0A087WSZ9 112 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 F8VVB4 439 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 F8VWA3 439 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 LINC01619G3V211 115 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 RNASEK-C17orf49H0YIS7 233 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 K7EPK0 472 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 SCAF4O95104 1147 aaKnown RBP6.88□□□□□ -1.31
HCG18-238ENST00000449544 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
HCG18-238ENST00000449544 AWAT1Q58HT5 328 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 C1orf159Q96HA4 380 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 ALX3O95076 343 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 IGHV3-48P01763 117 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 RD3LP0DJH9 198 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 CCL1P22362 96 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 TAS2R30P59541 319 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 TMEM95Q3KNT9 176 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 TMEM177Q53S58 311 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 OR1S2Q8NGQ3 325 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 FAM216AQ8WUB2 273 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 SSTP61278 116 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 FOXB2Q5VYV0 432 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 CST9LP1Q5W188 147 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 C8orf86Q6ZUL3 223 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 DUX3Q96PT4 197 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 TBX15Q96SF7 602 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 NAGKQ9UJ70 344 aa6.88□□□□□ -1.31
HCG18-238ENST00000449544 OR10J4P0C629 311 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
HCG18-238ENST00000449544 HSPE1P61604 102 aaKnown RBP6.87□□□□□ -1.31
HCG18-238ENST00000449544 BLCAPP62952 87 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 DTD1Q8TEA8 209 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 WNT10AQ9GZT5 417 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 SLC2A9Q9NRM0 540 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 EML6Q6ZMW3 1958 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 MARCH11A6NNE9 402 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 RPL35AP18077 110 aaKnown RBP6.87□□□□□ -1.31
HCG18-238ENST00000449544 RND2P52198 227 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 DEFA6Q01524 100 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 USMG5Q96IX5 58 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 WDFY4Q6ZS81 3184 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 FGF16O43320 207 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 DFFBO76075 338 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 OR5AC1P0C628 307 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 EFNB2P52799 333 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 DLX6P56179 175 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 PAX8Q06710 450 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 ZNF497Q6ZNH5 498 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 ST6GALNAC6Q969X2 333 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 CITED2Q99967 270 aaPredicted RBP6.87□□□□□ -1.31
HCG18-238ENST00000449544 NAA60Q9H7X0 242 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 TNFRSF13BO14836 293 aaPredicted RBP6.87□□□□□ -1.31
HCG18-238ENST00000449544 ATP6V1G1O75348 118 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 VENTXO95231 258 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 SPDEFO95238 335 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 MPZP25189 248 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 HTR2BP41595 481 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 PXDC1Q5TGL8 231 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 TMEM229BQ8NBD8 167 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 PTX4Q96A99 478 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 ATP5SQ99766 215 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 PEF1Q9UBV8 284 aaKnown RBP6.87□□□□□ -1.31
HCG18-238ENST00000449544 SELENOKQ9Y6D0 94 aa6.87□□□□□ -1.31
HCG18-238ENST00000449544 SMAD5-AS1Q9Y6J3 95 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms