RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 MED13Q9UHV7 2174 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 TRAV24A0A0B4J272 114 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 NPY1RP25929 384 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 IBA57Q5T440 356 aaKnown RBP10.47□□□□□ -0.73
UBE3B-204ENST00000449510 C1orf194Q5T5A4 169 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 WDR74Q6RFH5 385 aaPredicted RBP10.47□□□□□ -0.73
UBE3B-204ENST00000449510 TMEM54Q969K7 222 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 KCNIP2Q9NS61 270 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 SZT2Q5T011 3432 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 ARL3P36405 182 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 SOX8P57073 446 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 PMCHL1Q16048 86 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 KCNMB1Q16558 191 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 RPL39P5Q59GN2 51 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 TEPPQ6URK8 271 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 TGIF2LYQ8IUE0 185 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 OR8B2Q96RD0 313 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 OR4B1Q8NGF8 309 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 LYPD6BQ8NI32 183 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 SLC45A2Q9UMX9 530 aa10.46□□□□□ -0.73
UBE3B-204ENST00000449510 TMSB15BA0A087X1C1 80 aa10.46□□□□□ -0.74
UBE3B-204ENST00000449510 LHX2P50458 406 aa10.46□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF114Q8NC26 417 aa10.46□□□□□ -0.74
UBE3B-204ENST00000449510 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.74
UBE3B-204ENST00000449510 LPAR2Q9HBW0 351 aa10.46□□□□□ -0.74
UBE3B-204ENST00000449510 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.74
UBE3B-204ENST00000449510 A0A1W2PR77 199 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 CD46P15529 392 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 ACSF3Q4G176 576 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-204ENST00000449510 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 MBD3L1Q8WWY6 194 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 CRIM1Q9NZV1 1036 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 PLXNB1O43157 2135 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF891A8MT65 544 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-204ENST00000449510 NUDT3O95989 172 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 RPL30P62888 115 aaKnown RBP10.45□□□□□ -0.74
UBE3B-204ENST00000449510 SMIM21Q3B7S5 101 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 MS4A5Q9H3V2 200 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 PCOLCEQ15113 449 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 C6orf15Q6UXA7 325 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-204ENST00000449510 C22orf15Q8WYQ4 148 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 TMEM140Q9NV12 185 aa10.45□□□□□ -0.74
UBE3B-204ENST00000449510 F2Z2F3 143 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 NEURL1O76050 574 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 NTF4P34130 210 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 NHLH1Q02575 133 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 SPATA31B1PQ5VZV4 182 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 BEND2Q8NDZ0 799 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 OR5P3Q8WZ94 311 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 NPVFQ9HCQ7 196 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 LOC389332A0A1B0GUA5 103 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 CELA3BP08861 270 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 TIMP3P35625 211 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 KRTCAP3Q53RY4 240 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 FAM201AQ5SY85 155 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 LOXL2Q9Y4K0 774 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 CLDN14O95500 239 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 CRYGSP22914 178 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 HTR1DP28221 377 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 EPHA8P29322 1005 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-204ENST00000449510 GCHFRP30047 84 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 RND2P52198 227 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 WDR73Q6P4I2 378 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 LSM10Q969L4 123 aaKnown RBP10.44□□□□□ -0.74
UBE3B-204ENST00000449510 GNB4Q9HAV0 340 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 TMEM242Q9NWH2 141 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 IL19Q9UHD0 177 aa10.44□□□□□ -0.74
UBE3B-204ENST00000449510 OOEPA6NGQ2 149 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 COMPP49747 757 aaPredicted RBP10.43□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF83P51522 516 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 LCN2P80188 198 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF841Q6ZN19 808 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 CARFQ8N187 725 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 STPG3Q8N7X2 389 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 PRSS3P2Q8NHM4 247 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 POM121L2Q96KW2 1035 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
UBE3B-204ENST00000449510 TCFL5Q9UL49 500 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 A0A1B0GW64 132 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 KLRC4-KLRK1H3BQV0 150 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 PTGDSP41222 190 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF324BQ6AW86 544 aaPredicted RBP10.43□□□□□ -0.74
UBE3B-204ENST00000449510 ZNRF1Q8ND25 227 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 OR8A1Q8NGG7 326 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 NEU1Q99519 415 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 IGHV1-45A0A0A0MS14 117 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 J3QR06 171 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 IGFBP2P18065 325 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 CTSSP25774 331 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 MRPS11P82912 194 aaKnown RBP10.43□□□□□ -0.74
UBE3B-204ENST00000449510 ZNF718Q3SXZ3 478 aa10.43□□□□□ -0.74
UBE3B-204ENST00000449510 MUC21Q5SSG8 566 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms