RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
TNF-208ENST00000449264 CDC42EP3Q9UKI2 254 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 TET2Q6N021 2002 aaPredicted RBP11.69□□□□□ -0.54
TNF-208ENST00000449264 KBTBD11O94819 623 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 OR2A4O95047 310 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 P0C879 139 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 TRAPPC2P0DI81 140 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 TRAPPC2BP0DI82 140 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 SRD5A1P18405 259 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 UBE2KP61086 200 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 PSG5Q15238 335 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 Q6ZRM9 215 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 Q8N6K4 173 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 SIGLECL1Q8N7X8 197 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 OR1S1Q8NH92 325 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 WDR89Q96FK6 387 aaPredicted RBP11.69□□□□□ -0.54
TNF-208ENST00000449264 OR2A7Q96R45 310 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 RNF5Q99942 180 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 TCF19Q9Y242 345 aa11.69□□□□□ -0.54
TNF-208ENST00000449264 BTBD17A6NE02 478 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 SPDEFO95238 335 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 SCGB1D2O95969 90 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 HLA-GP17693 338 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 AANATQ16613 207 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 AKAP14Q86UN6 197 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 PUSL1Q8N0Z8 303 aaKnown RBP11.68□□□□□ -0.54
TNF-208ENST00000449264 ZBTB8BQ8NAP8 495 aaPredicted RBP11.68□□□□□ -0.54
TNF-208ENST00000449264 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 VSTM2AQ8TAG5 236 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 CLCC1Q96S66 551 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 SLC25A33Q9BSK2 321 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 BET1LQ9NYM9 111 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 FN1P02751 2386 aaKnown RBP11.68□□□□□ -0.54
TNF-208ENST00000449264 RRHO14718 337 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 HOXA3O43365 443 aaPredicted RBP11.68□□□□□ -0.54
TNF-208ENST00000449264 CCNKO75909 580 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 SNAPC5O75971 98 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 IER3P46695 156 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 Q6YL49 198 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 C2orf50Q96LR7 162 aa11.68□□□□□ -0.54
TNF-208ENST00000449264 RANGRFQ9HD47 186 aaPredicted RBP11.68□□□□□ -0.54
TNF-208ENST00000449264 TEP1Q99973 2627 aaKnown RBP11.68□□□□□ -0.54
TNF-208ENST00000449264 A0A1B0GU03 582 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 UPK2O00526 184 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 GNB1P62873 340 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 RELBQ01201 579 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 LRRC37A5PQ49AS3 106 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 RBMS3Q6XE24 437 aaKnown RBP11.67□□□□□ -0.54
TNF-208ENST00000449264 NPBQ8NG41 125 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
TNF-208ENST00000449264 C1RLQ9NZP8 487 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 PITPNC1Q9UKF7 332 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 SIGLEC9Q9Y336 463 aa11.67□□□□□ -0.54
TNF-208ENST00000449264 A6NDX4 124 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 C15orf61A6NNL5 157 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 OR2F2O95006 317 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 NDUFA3O95167 84 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 GIPP09681 153 aaPredicted RBP11.66□□□□□ -0.54
TNF-208ENST00000449264 MYOD1P15172 320 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 S100A10P60903 97 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
TNF-208ENST00000449264 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 FOXRED2Q8IWF2 684 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 TEX45Q8NA69 505 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 OR5R1Q8NH85 324 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 TMEM167AQ8TBQ9 72 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 RBM14Q96PK6 669 aaKnown RBP11.66□□□□□ -0.54
TNF-208ENST00000449264 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 FYTTD1Q96QD9 318 aaKnown RBP11.66□□□□□ -0.54
TNF-208ENST00000449264 QTRT1Q9BXR0 403 aaKnown RBP11.66□□□□□ -0.54
TNF-208ENST00000449264 PLSCR3Q9NRY6 295 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.66□□□□□ -0.54
TNF-208ENST00000449264 MOB4Q9Y3A3 225 aa11.66□□□□□ -0.54
TNF-208ENST00000449264 PFDN1O60925 122 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 OPN1MWP04001 364 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 CRYGBP07316 175 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 OPN1MW2P0DN77 364 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 OPN1MW3P0DN78 364 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 SLC25A6P12236 298 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 SPINK9Q5DT21 86 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 PPP1R27Q86WC6 154 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 FAM71E2Q8N5Q1 922 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 OR8H1Q8NGG4 311 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 OR4D5Q8NGN0 318 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 OR4A5Q8NH83 315 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 NMES1Q9C002 83 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 CUBNO60494 3623 aa11.65□□□□□ -0.54
TNF-208ENST00000449264 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.55
TNF-208ENST00000449264 SMLR1H3BR10 107 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 ST8SIA3O43173 380 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 CHST1O43916 411 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 ACTL6BO94805 426 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 CA2P00918 260 aa11.65□□□□□ -0.55
TNF-208ENST00000449264 IL6RP08887 468 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms