RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 C10orf55Q5SWW7 151 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 ZNF562Q6V9R5 426 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 CENPVQ7Z7K6 275 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-211ENST00000449159 PUSL1Q8N0Z8 303 aaKnown RBP8.35□□□□□ -1.07
SMPD4-211ENST00000449159 TEX45Q8NA69 505 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 TMEM167AQ8TBQ9 72 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 CD300LFQ8TDQ1 290 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 ABHD5Q8WTS1 349 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 CHPT1Q8WUD6 406 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 DEDD2Q8WXF8 326 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 ARPC1AQ92747 370 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 R3HDM4Q96D70 268 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 OR2A7Q96R45 310 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 CCDC32Q9BV29 185 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 NAA60Q9H7X0 242 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 PLEKHA2Q9HB19 425 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 COMMD9Q9P000 198 aa8.35□□□□□ -1.07
SMPD4-211ENST00000449159 NOTCH1P46531 2555 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 C3orf85A0A1B0GTC6 90 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 CRYM-AS1A6NIL9 109 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 FBXO24O75426 580 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 KRASP01116 189 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 APELAP0DMC3 54 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 NQO2P16083 231 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 G6PCP35575 357 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 FXYD3Q14802 87 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 TNXAQ16473 311 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 LCNL1Q6ZST4 164 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 TCTEX1D1Q8N7M0 179 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 CCDC71LQ8N9Z2 235 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 WDR12Q9GZL7 423 aaKnown RBP8.34□□□□□ -1.07
SMPD4-211ENST00000449159 TMEM140Q9NV12 185 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
SMPD4-211ENST00000449159 NAP1L6A6NFF2 107 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 LYRM1O43325 122 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 SOX15O60248 233 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 CNIH1O95406 144 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 SERPINE2P07093 398 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 IL6RP08887 468 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 AKR1C4P17516 323 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 VDAC1P21796 283 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 CRIP2P52943 208 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 SUPT4H1P63272 117 aaKnown RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 DEFA6Q01524 100 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 IFITM3Q01628 133 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 RBMS2Q15434 407 aaKnown RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 ASPHD1Q5U4P2 390 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 TMED4Q7Z7H5 227 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 MMD2Q8IY49 270 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 LFNGQ8NES3 379 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 DMBX1Q8NFW5 382 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 LHFPL5Q8TAF8 219 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 VSTM2AQ8TAG5 236 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 CASTOR1Q8WTX7 329 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 SRSF12Q8WXF0 261 aaKnown RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 SEC22AQ96IW7 307 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 FAM212BQ9NTI7 297 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-211ENST00000449159 BET1LQ9NYM9 111 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 ZNF580Q9UK33 172 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 TBC1D24Q9ULP9 559 aa8.33□□□□□ -1.08
SMPD4-211ENST00000449159 TEX13DA0A0J9YY54 714 aaPredicted RBP8.32□□□□□ -1.08
SMPD4-211ENST00000449159 A0A1B0GW64 132 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 CENPXA8MT69 81 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 E7EUB6 86 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 UPK2O00526 184 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 UPK1BO75841 260 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 NDUFB6O95139 128 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 OPN1MWP04001 364 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 OR9G9P0C7N8 305 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 OPN1MW2P0DN77 364 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 OPN1MW3P0DN78 364 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 UCP1P25874 307 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 PPIFP30405 207 aaKnown RBP8.32□□□□□ -1.08
SMPD4-211ENST00000449159 ERVK-16P61578 105 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 RPL8P62917 257 aaKnown RBP8.32□□□□□ -1.08
SMPD4-211ENST00000449159 SLC35B1P78383 322 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 CD83Q01151 205 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 IZUMO4Q1ZYL8 232 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 UNQ5815/PRO19632Q6UWF5 114 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 MINDY2Q8NBR6 621 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 OR4X2Q8NGF9 303 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 GLYATL2Q8WU03 294 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 SCGB3A2Q96PL1 93 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 SLC25A21Q9BQT8 299 aaPredicted RBP8.32□□□□□ -1.08
SMPD4-211ENST00000449159 C7orf50Q9BRJ6 194 aaKnown RBP8.32□□□□□ -1.08
SMPD4-211ENST00000449159 TMEM222Q9H0R3 208 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 FLVCR2Q9UPI3 526 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 NSG2Q9Y328 171 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 NUBP2Q9Y5Y2 271 aa8.32□□□□□ -1.08
SMPD4-211ENST00000449159 PRKDCP78527 4128 aaKnown RBP8.31□□□□□ -1.08
SMPD4-211ENST00000449159 A0A1W2PN81 502 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms