RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 REG1AP05451 166 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 IL6RP08887 468 aaPredicted RBP13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 AREGP15514 252 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 GADD45AP24522 165 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 PLA2G7Q13093 441 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 HES5Q5TA89 166 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 UNQ9165/PRO28630Q6UXU0 137 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 H1FOOQ8IZA3 346 aaPredicted RBP13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 VSTM2AQ8TAG5 236 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 UFD1Q92890 307 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 RNF183Q96D59 192 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 FANCD2OSQ96PS1 177 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 OR2A7Q96R45 310 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 MRPL27Q9P0M9 148 aaKnown RBP13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 HERC2O95714 4834 aa13.38□□□□□ -0.27
CHCHD3-203ENST00000448878 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 HSMCR30P0CW71 290 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 HIST1H1BP16401 226 aaKnown RBP13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 PSMB6P28072 239 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 RANBP1P43487 201 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 PLET1Q6UQ28 207 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 ZNF645Q8N7E2 425 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 FBLIM1Q8WUP2 373 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
CHCHD3-203ENST00000448878 TRBV7-1A0A0A6YYK4 115 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 MFSD2BA6NFX1 497 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 KBTBD11O94819 623 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 DIRAS3O95661 229 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 CD36P16671 472 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 CALRP27797 417 aaKnown RBP13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 GPR183P32249 361 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 OR10R2Q8NGX6 335 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 TCTEX1D2Q8WW35 142 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 FBXL17Q9UF56 701 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 V9GY05 133 aa13.36□□□□□ -0.27
CHCHD3-203ENST00000448878 IFNA4P05014 189 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 ZNF735P0CB33 412 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 RPA2P15927 270 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 ATF4P18848 351 aaPredicted RBP13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 MAS1LP35410 378 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 RPS25P62851 125 aaKnown RBP13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 RPL30P62888 115 aaKnown RBP13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 LAMTOR1Q6IAA8 161 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 TMEM91Q6ZNR0 172 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 SPAG8Q99932 426 aaPredicted RBP13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 FKBP14Q9NWM8 211 aa13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 RBMX2Q9Y388 322 aaKnown RBP13.35□□□□□ -0.27
CHCHD3-203ENST00000448878 KIR2DL5BA0A0G2JN68 375 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 KIR2DL5BA0A0G2JPC4 375 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 CRYGCP07315 174 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 C8orf88P0DMB2 117 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 MYOD1P15172 320 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 CTRB1P17538 263 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 NFYAP23511 347 aaPredicted RBP13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 CTRB2Q6GPI1 263 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 KIR2DL5AQ8N109 375 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 PACRGLQ8N7B6 248 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 KIR2DL5BQ8NHK3 375 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 TMEM167AQ8TBQ9 72 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 C5orf66Q9H5L9 145 aa13.34□□□□□ -0.27
CHCHD3-203ENST00000448878 IGKV1D-8A0A087WSZ0 117 aa13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 A0A1B0GW64 132 aa13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 HIST1H1DP16402 221 aaKnown RBP13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 GALP22466 123 aa13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 FCGR2BP31994 310 aaPredicted RBP13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 C8orf4Q9NR00 106 aa13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 LSM2Q9Y333 95 aaKnown RBP13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 OR2W1Q9Y3N9 320 aa13.33□□□□□ -0.28
CHCHD3-203ENST00000448878 IGLV11-55A0A075B6I3 123 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 ERICH4A6NGS2 130 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 MFNGO00587 321 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 SLC22A5O76082 557 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 HRASP01112 189 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 RPL8P62917 257 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 RBMS2Q15434 407 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 TRAM1Q15629 374 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 PUSL1Q8N0Z8 303 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 C11orf45Q8TAV5 145 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 GALNT14Q96FL9 552 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 RARRES2Q99969 163 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 HRASLSQ9HDD0 168 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 SCN3BQ9NY72 215 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 TAS2R8Q9NYW2 309 aa13.32□□□□□ -0.28
CHCHD3-203ENST00000448878 PCLOQ9Y6V0 5065 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 TSPAN4O14817 238 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 PRR20EP86478 221 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 PRR20CP86479 221 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 PRR20DP86480 221 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 PRR20BP86481 221 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms