RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TSPAN7P41732 249 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 SF3B5Q9BWJ5 86 aaKnown RBP7.73□□□□□ -1.17
NIPBL-202ENST00000448238 LTN1O94822 1766 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 DIP2CQ9Y2E4 1556 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 CXCL3P19876 107 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 EVI2AP22794 236 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 RASL11AQ6T310 242 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 VSTM2LQ96N03 204 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 DOCK4Q8N1I0 1966 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 HOXB1P14653 301 aaPredicted RBP7.73□□□□□ -1.17
NIPBL-202ENST00000448238 ZNF250P15622 560 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 CRYBB3P26998 211 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 UNQ5815/PRO19632Q6UWF5 114 aa7.73□□□□□ -1.17
NIPBL-202ENST00000448238 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
NIPBL-202ENST00000448238 A0A0B4J2E0 115 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 A0A1B0GX12 115 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 FOXI3A8MTJ6 420 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 RPL36A-HNRNPH2H7BZ11 118 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 K7ERS5 55 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 MYOD1P15172 320 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 SLC25A53Q5H9E4 307 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 C12orf73Q69YU5 71 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 INO80CQ6PI98 192 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PCSK4Q6UW60 755 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 CD300LDQ6UXZ3 194 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PPIAL4EA0A075B759 164 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PPIAL4FP0DN26 164 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PDCD1Q15116 288 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 CHCHD1Q96BP2 118 aaKnown RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 TEX37Q96LM6 180 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PPIAL4AQ9Y536 164 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 A0A0G2JMM0 328 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 A0A1W2PPB8 328 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 A0A1W2PRD5 423 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 A0A1W2PRF3 423 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 A0A1W2PRM7 423 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 KIR3DP1A8MWS1 328 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 MOSP00540 346 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 IGKCP01834 107 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 EMDP50402 254 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 CGB2Q6NT52 195 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PDCD11Q14690 1871 aaKnown RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 SFTA2Q6UW10 78 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 CDIPTO14735 213 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 IQCF6A8MYZ5 107 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 CENPVQ7Z7K6 275 aaPredicted RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 CHST5Q9GZS9 411 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 ZFP64Q9NPA5 681 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 HCFC1R1Q9NWW0 138 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 NEUROG3Q9Y4Z2 214 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 PREX1Q8TCU6 1659 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 UMODP07911 640 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 RIMKLAQ8IXN7 391 aa7.72□□□□□ -1.17
NIPBL-202ENST00000448238 GTF3AQ92664 365 aaKnown RBP7.72□□□□□ -1.17
NIPBL-202ENST00000448238 IGKV6D-41A0A0C4DH26 115 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 PTP4A3O75365 173 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 WDYHV1Q96HA8 205 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.17
NIPBL-202ENST00000448238 UBR1Q8IWV7 1749 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 F2Z2F3 143 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 ETHE1O95571 254 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 RTN4RL2Q86UN3 420 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 MRPL24Q96A35 216 aaKnown RBP7.71□□□□□ -1.17
NIPBL-202ENST00000448238 C8orf44Q96CB5 159 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 A0A087WWC5 75 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 A0A1W2PR80 420 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 BAALCQ8WXS3 180 aa7.71□□□□□ -1.17
NIPBL-202ENST00000448238 FMN2Q9NZ56 1722 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 A0A087WX48 190 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 ANKRD29Q8N6D5 301 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 FBXL15Q9H469 300 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 FAM208BQ5VWN6 2430 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 LILRA5A6NI73 299 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 SNAI2O43623 268 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 MDKP21741 143 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-202ENST00000448238 C9orf50Q5SZB4 431 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 UTF1Q5T230 341 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 BHLHA9Q7RTU4 235 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 ATG4DQ86TL0 474 aaPredicted RBP7.71□□□□□ -1.18
NIPBL-202ENST00000448238 PLPPR1Q8TBJ4 325 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM222Q9H0R3 208 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 MGST3O14880 152 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 MPTX1A8MV57 137 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 CLDN14O95500 239 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 PNLIPP16233 465 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 HOGA1Q86XE5 327 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 LINC01587Q99440 93 aa7.71□□□□□ -1.18
NIPBL-202ENST00000448238 IGHV3-21A0A0B4J1V1 117 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 OR9G9P0C7N8 305 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 CD28P10747 220 aa7.7□□□□□ -1.18
NIPBL-202ENST00000448238 MS4A4AQ96JQ5 239 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms