RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 Q6ZS46 218 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 LYZL2Q7Z4W2 148 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 SLC35G3Q8N808 338 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 TEX45Q8NA69 505 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 RNASE11Q8TAA1 199 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 OR2A7Q96R45 310 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 RAB18Q9NP72 206 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 TRIM77I1YAP6 450 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 M0QZK8 103 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 PRAF2O60831 178 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 KBTBD11O94819 623 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 OR9G9P0C7N8 305 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 TATDN3Q17R31 274 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 H2BFWTQ7Z2G1 175 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 PRIMA1Q86XR5 153 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 UXS1Q8NBZ7 420 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 COQ8AQ8NI60 647 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 IL22RA2Q969J5 263 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 AIFM2Q9BRQ8 373 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 RANBP3Q9H6Z4 567 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 ZNF430Q9H8G1 570 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 GPN1Q9HCN4 374 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 NSG2Q9Y328 171 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 ALG5Q9Y673 324 aa14.27□□□□□ -0.13
TRAPPC4-203ENST00000447216 UPK2O00526 184 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 CA2P00918 260 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 HOXB5P09067 269 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 P0C879 139 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 MYOD1P15172 320 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 PRSS8Q16651 343 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 PPP1R27Q86WC6 154 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 C12orf45Q8N5I9 185 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 LRTM2Q8N967 370 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 MINDY2Q8NBR6 621 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 TMEM167AQ8TBQ9 72 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 RRNAD1Q96FB5 475 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 PHB2Q99623 299 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 HSPB9Q9BQS6 159 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 NPFFR1Q9GZQ6 430 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 BET1LQ9NYM9 111 aa14.26□□□□□ -0.13
TRAPPC4-203ENST00000447216 A0A0B4J2A0 478 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 CREBL2O60519 120 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 ADAP1O75689 374 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 ATG12O94817 140 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 IL6RP08887 468 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 OR2B8PP59922 312 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 GNB1P62873 340 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 VSTM2AQ8TAG5 236 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 GPR146Q96CH1 333 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 ZNF702PQ9H963 129 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 SHPKQ9UHJ6 478 aa14.25□□□□□ -0.13
TRAPPC4-203ENST00000447216 LINC01548A6NM66 108 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 CRYBA1P05813 215 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 SSBP2P81877 361 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 RELBQ01201 579 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 TNXAQ16473 311 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 TMEM95Q3KNT9 176 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 C10orf55Q5SWW7 151 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 GGNBP1Q5YKI7 109 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 Q6ZRM9 215 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 OR51J1Q9H342 316 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 MMP24Q9Y5R2 645 aa14.24□□□□□ -0.13
TRAPPC4-203ENST00000447216 IGHV7-81A0A0B4J1V7 117 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 C7orf66A4D0T2 115 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 DBX1A6NMT0 343 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 SNRPGP15A8MWD9 76 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 CCSO14618 274 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 SNAPC5O75971 98 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 VDAC1P21796 283 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 CX3CL1P78423 397 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 NDPQ00604 133 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 C2orf68Q2NKX9 166 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 NMSQ5H8A3 153 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 Q6ZSV7 163 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 MMD2Q8IY49 270 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 OR4A5Q8NH83 315 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 LSM10Q969L4 123 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 PRSS22Q9GZN4 317 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 CACNG5Q9UF02 275 aa14.23□□□□□ -0.13
TRAPPC4-203ENST00000447216 DUXBA0A1W2PPF3 345 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 CNIH1O95406 144 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 OPN1MWP04001 364 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 OPN1MW2P0DN77 364 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 OPN1MW3P0DN78 364 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 HLA-GP17693 338 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 RPL8P62917 257 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 FAM219AQ8IW50 185 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 OR4A16Q8NH70 328 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 ABHD5Q8WTS1 349 aa14.22□□□□□ -0.13
TRAPPC4-203ENST00000447216 C15orf61A6NNL5 157 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 MPTX1A8MV57 137 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 SSNA1O43805 119 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 RBMXL2O75526 392 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 RPL15P61313 204 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 FXYD3Q14802 87 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 ARSJQ5FYB0 599 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 SLC35E3Q7Z769 313 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 CADM3Q8N126 398 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms