RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 BTNL8Q6UX41 500 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 C19orf35Q6ZS72 473 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 Q6ZWC4 215 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 KCTD9Q7L273 389 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 WFDC3Q8IUB2 231 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 VKORC1L1Q8N0U8 176 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 ZNF645Q8N7E2 425 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 OR1L6Q8NGR2 347 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 CCDC140Q96MF4 163 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 OR2A7Q96R45 310 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 SLC2A9Q9NRM0 540 aa18.19■□□□□ 0.5
PMS1-214ENST00000446877 CD36P16671 472 aa18.18■□□□□ 0.5
PMS1-214ENST00000446877 OR2B11Q5JQS5 317 aa18.18■□□□□ 0.5
PMS1-214ENST00000446877 SLC38A6Q8IZM9 456 aa18.18■□□□□ 0.5
PMS1-214ENST00000446877 MARC2Q969Z3 335 aa18.18■□□□□ 0.5
PMS1-214ENST00000446877 ANKRD65E5RJM6 399 aa18.17■□□□□ 0.5
PMS1-214ENST00000446877 IL6RP08887 468 aaPredicted RBP18.17■□□□□ 0.5
PMS1-214ENST00000446877 DEFA4P12838 97 aa18.17■□□□□ 0.5
PMS1-214ENST00000446877 HIST1H1BP16401 226 aaKnown RBP18.17■□□□□ 0.5
PMS1-214ENST00000446877 HIST1H1DP16402 221 aaKnown RBP18.17■□□□□ 0.5
PMS1-214ENST00000446877 MAS1LP35410 378 aa18.17■□□□□ 0.5
PMS1-214ENST00000446877 EWSR1Q01844 656 aaKnown RBP eCLIP18.17■□□□□ 0.5
PMS1-214ENST00000446877 TMEM217Q8N7C4 229 aa18.17■□□□□ 0.5
PMS1-214ENST00000446877 FANCD2OSQ96PS1 177 aa18.17■□□□□ 0.5
PMS1-214ENST00000446877 MFNGO00587 321 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 SLC22A5O76082 557 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 KBTBD11O94819 623 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 CLEC3BP05452 202 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 CRYGCP07315 174 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 PSMB6P28072 239 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 ZNF585BQ52M93 769 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 Q6ZS49 121 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 RPP25LQ8N5L8 163 aaKnown RBP18.16■□□□□ 0.5
PMS1-214ENST00000446877 OR2C3Q8N628 320 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 OR4S2Q8NH73 311 aa18.16■□□□□ 0.5
PMS1-214ENST00000446877 TRBV7-1A0A0A6YYK4 115 aa18.15■□□□□ 0.5
PMS1-214ENST00000446877 UBE2CO00762 179 aa18.15■□□□□ 0.5
PMS1-214ENST00000446877 ZNF735P0CB33 412 aa18.15■□□□□ 0.5
PMS1-214ENST00000446877 RPL30P62888 115 aaKnown RBP18.15■□□□□ 0.5
PMS1-214ENST00000446877 TMEM167AQ8TBQ9 72 aa18.15■□□□□ 0.5
PMS1-214ENST00000446877 CXorf58Q96LI9 332 aa18.15■□□□□ 0.5
PMS1-214ENST00000446877 MRPL27Q9P0M9 148 aaKnown RBP18.15■□□□□ 0.5
PMS1-214ENST00000446877 RBMX2Q9Y388 322 aaKnown RBP18.15■□□□□ 0.5
PMS1-214ENST00000446877 OR2W1Q9Y3N9 320 aa18.15■□□□□ 0.5
PMS1-214ENST00000446877 IGKV1D-8A0A087WSZ0 117 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 METTL21EPA6NDL7 271 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 E7EUB6 86 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 RAB27BO00194 218 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 CTXN2P0C2S0 81 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 AREGP15514 252 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 ATF4P18848 351 aaPredicted RBP18.14■□□□□ 0.49
PMS1-214ENST00000446877 CRHBPP24387 322 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 IRF3Q14653 427 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 SSX1Q16384 188 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 DEFB135Q30KP9 77 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 STPG3Q8N7X2 389 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 TCTEX1D2Q8WW35 142 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 UFC1Q9Y3C8 167 aa18.14■□□□□ 0.49
PMS1-214ENST00000446877 PDCD5O14737 125 aa18.13■□□□□ 0.49
PMS1-214ENST00000446877 C8orf88P0DMB2 117 aa18.13■□□□□ 0.49
PMS1-214ENST00000446877 GALP22466 123 aa18.13■□□□□ 0.49
PMS1-214ENST00000446877 FABP5Q01469 135 aa18.13■□□□□ 0.49
PMS1-214ENST00000446877 ACOT13Q9NPJ3 140 aa18.13■□□□□ 0.49
PMS1-214ENST00000446877 HLA-DQB1P01920 261 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 CTRB1P17538 263 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 RAB6AP20340 208 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 NFYAP23511 347 aaPredicted RBP18.12■□□□□ 0.49
PMS1-214ENST00000446877 DTYMKP23919 212 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 ARL6IP1Q15041 203 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 RCN1Q15293 331 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 CTRB2Q6GPI1 263 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 UNQ9165/PRO28630Q6UXU0 137 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 PUSL1Q8N0Z8 303 aaKnown RBP18.12■□□□□ 0.49
PMS1-214ENST00000446877 HSD17B10Q99714 261 aaKnown RBP18.12■□□□□ 0.49
PMS1-214ENST00000446877 SPAG8Q99932 426 aaPredicted RBP18.12■□□□□ 0.49
PMS1-214ENST00000446877 VCXQ9H320 206 aa18.12■□□□□ 0.49
PMS1-214ENST00000446877 HRASP01112 189 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 MYOD1P15172 320 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 ELLP55199 621 aaPredicted RBP18.11■□□□□ 0.49
PMS1-214ENST00000446877 RPL8P62917 257 aaKnown RBP18.11■□□□□ 0.49
PMS1-214ENST00000446877 MLLT11Q13015 90 aaPredicted RBP18.11■□□□□ 0.49
PMS1-214ENST00000446877 KLK9Q2XQG4 91 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 C5orf66Q9H5L9 145 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 UBQLN2Q9UHD9 624 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 KLK9Q9UKQ9 250 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 SPATA2Q9UM82 520 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 TPRKBQ9Y3C4 175 aa18.11■□□□□ 0.49
PMS1-214ENST00000446877 KIR2DL5BA0A0G2JN68 375 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 KIR2DL5BA0A0G2JPC4 375 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 A0A1B0GW64 132 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 REG1AP05451 166 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 GPR183P32249 361 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 OGFRL1Q5TC84 451 aaPredicted RBP18.1■□□□□ 0.49
PMS1-214ENST00000446877 PLET1Q6UQ28 207 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 KIR2DL5AQ8N109 375 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 KIR2DL5BQ8NHK3 375 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 PHLDA1Q8WV24 401 aaPredicted RBP18.1■□□□□ 0.49
PMS1-214ENST00000446877 RNF183Q96D59 192 aa18.1■□□□□ 0.49
PMS1-214ENST00000446877 IGLV11-55A0A075B6I3 123 aa18.09■□□□□ 0.49
PMS1-214ENST00000446877 MFSD2BA6NFX1 497 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms