RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 NPFFO15130 113 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 IGHV1-2P23083 117 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 ANOS1P23352 680 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 EFNA4P52798 201 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 SRSF9Q13242 221 aaKnown RBP eCLIP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 ATP1A1-AS1Q5TC04 95 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 TAF15Q92804 592 aaKnown RBP eCLIP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF488Q96MN9 340 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 UMODP07911 640 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 RND2P52198 227 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 FAM27E3Q08E93 113 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 OR5AU1Q8NGC0 362 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 OR4B1Q8NGF8 309 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 PSMG3Q9BT73 122 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-204ENST00000446349 V9GYH0 126 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 IGKV3D-15A0A087WSY6 115 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 YPEL1O60688 119 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 CKS2P33552 79 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 SIGIRRQ6IA17 410 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 YPEL2Q96QA6 119 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 GBF1Q92538 1859 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 ATP6V0CP27449 155 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 CD200R1LQ6Q8B3 271 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 NUP210Q8TEM1 1887 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-204ENST00000446349 MEX3AA1L020 520 aaKnown RBP7.26□□□□□ -1.25
PTPN3-204ENST00000446349 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 IGSF11Q5DX21 431 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 VWA1Q6PCB0 445 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 FAM169BQ8N8A8 192 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 DCAF16Q9NXF7 216 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 HSPB1P04792 205 aaKnown RBP7.26□□□□□ -1.25
PTPN3-204ENST00000446349 WNT5AP41221 380 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 LRTM2Q8N967 370 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 IGKV1D-42A0A075B6H8 117 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 CENPVL1A0A0U1RR11 272 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 GPX4P36969 197 aaPredicted RBP7.26□□□□□ -1.25
PTPN3-204ENST00000446349 OVCH2Q7RTZ1 564 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 BMPERQ8N8U9 685 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 RNF5Q99942 180 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 OR1N2Q8NGR9 330 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 RPRMQ9NS64 109 aa7.26□□□□□ -1.25
PTPN3-204ENST00000446349 AP4M1O00189 453 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 CIDEAO60543 219 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 HCP5Q6MZN7 132 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 TOMM20LQ6UXN7 152 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 SELENOHQ8IZQ5 122 aaKnown RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 NRTNQ99748 197 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 A1L4Q6 167 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 GGCTO75223 188 aaKnown RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 C8orf46Q8TAG6 207 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 B4DSR2 109 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 PMS2P11Q13670 270 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 C3orf36Q3SXR2 165 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 IBA57Q5T440 356 aaKnown RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 KCNS1Q96KK3 526 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 SLC50A1Q9BRV3 221 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 NCOR1O75376 2440 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM14DPA8MWL7 114 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 LEPP41159 167 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 LCN2P80188 198 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 MBNL2Q5VZF2 373 aaKnown RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM252Q8N6L7 170 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 C21orf62Q9NYP8 219 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 YLPM1P49750 1951 aaKnown RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 A0A1B0GVG6 124 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 C7orf66A4D0T2 115 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 PGPA6NDG6 321 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 NBR2O15453 112 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 GDF9O60383 454 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 C17orf82Q86X59 251 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 PLSCR4Q9NRQ2 329 aa7.25□□□□□ -1.25
PTPN3-204ENST00000446349 SOX21Q9Y651 276 aaPredicted RBP7.25□□□□□ -1.25
PTPN3-204ENST00000446349 A0A1W2PPE3 182 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 LILRA1O75019 489 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 LINC00271P0C7V0 271 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 ASIPP42127 132 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 SUCLG1P53597 346 aaKnown RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 C9orf106Q8NAJ2 232 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 CACNA1EQ15878 2313 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 WNT2P09544 360 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 TFPI2P48307 235 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 MEF2BQ02080 365 aaPredicted RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 PDZD11Q5EBL8 140 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 SGK494Q96LW2 274 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 RNF114Q9Y508 228 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 PRSS12P56730 875 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 UBE2V2Q15819 145 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 PVRIGQ6DKI7 326 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 CYP2G1PQ6ZSU1 146 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 VWCEQ96DN2 955 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 AQP10Q96PS8 301 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 TLNRD1Q9H1K6 362 aa7.24□□□□□ -1.25
PTPN3-204ENST00000446349 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
PTPN3-204ENST00000446349 IGHV3-72A0A0B4J1Y9 119 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms