RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
VPS52-212ENST00000445902 OCIAD1Q9NX40 245 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
VPS52-212ENST00000445902 MRPL33O75394 65 aaKnown RBP11.63□□□□□ -0.55
VPS52-212ENST00000445902 CXorf1O96002 111 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 CA2P00918 260 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 STAG3L2P0CL84 134 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 STAG3L3P0CL85 134 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 EN2P19622 333 aaPredicted RBP11.63□□□□□ -0.55
VPS52-212ENST00000445902 GNG3P63215 75 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 RELBQ01201 579 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 TREML4Q6UXN2 200 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 MS4A5Q9H3V2 200 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 BET1LQ9NYM9 111 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 VAMP3Q15836 100 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 RIPPLY2Q5TAB7 128 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 TCTEX1D1Q8N7M0 179 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 LOXL4Q96JB6 756 aa11.63□□□□□ -0.55
VPS52-212ENST00000445902 LINC00473A8K010 186 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 ACTL6BO94805 426 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 CA1P00915 261 aaPredicted RBP11.62□□□□□ -0.55
VPS52-212ENST00000445902 PRRX1P54821 245 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 LTC4SQ16873 150 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 ZNF718Q3SXZ3 478 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 Q56UQ5 140 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 TMEM136Q6ZRR5 245 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 SYT13Q7L8C5 426 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 RPS19BP1Q86WX3 136 aaKnown RBP11.62□□□□□ -0.55
VPS52-212ENST00000445902 TSKUQ8WUA8 353 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 RAB1CQ92928 201 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 CLEC7AQ9BXN2 247 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 GNB1LQ9BYB4 327 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 IGHV1-45A0A0A0MS14 117 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 A0A1W2PQM1 296 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 BMPR1BO00238 502 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 GCHFRP30047 84 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 CENPWQ5EE01 88 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 PQLC2Q6ZP29 291 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 TPRX1Q8N7U7 411 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 SLC35D1Q9NTN3 355 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 SERTAD4Q9NUC0 356 aa11.62□□□□□ -0.55
VPS52-212ENST00000445902 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 TOMM40O96008 361 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 CGAP01215 116 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 STUMQ69YW2 141 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 VPS25Q9BRG1 176 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 CACNA1EQ15878 2313 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 C2CD4DB7Z1M9 353 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 K7EP13 123 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 NXPH2O95156 264 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 CCL7P80098 99 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 CATR1Q13166 79 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 MOB1BQ7L9L4 216 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 ABHD12Q8N2K0 398 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 RFESDQ8TAC1 157 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
VPS52-212ENST00000445902 PRR14LQ5THK1 2151 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 IGHV5-10-1A0A0J9YXX1 117 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 CDIPTO14735 213 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 SSPNQ14714 243 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
VPS52-212ENST00000445902 OR4P4Q8NGL7 312 aa11.61□□□□□ -0.55
VPS52-212ENST00000445902 DMDP11532 3685 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 C12orf77C9JDV5 145 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 COX6A1P12074 109 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 CRYBB3P26998 211 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 GNG4P50150 75 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 AESQ08117 197 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 DCAF12Q5T6F0 453 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 GALMQ96C23 342 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 PHF7Q9BWX1 381 aaPredicted RBP11.6□□□□□ -0.55
VPS52-212ENST00000445902 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 PSPNO60542 156 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
VPS52-212ENST00000445902 TNFSF4P23510 183 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 LDLRAD2Q5SZI1 272 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 TUSC5Q8IXB3 177 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 MRGPRDQ8TDS7 321 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 KCNIP1Q9NZI2 227 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 CDC42EP3Q9UKI2 254 aa11.6□□□□□ -0.55
VPS52-212ENST00000445902 IGHV2-70DA0A0C4DH43 119 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 FAM166BA8MTA8 275 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 RAB29O14966 203 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 IGHV3-13P01766 116 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 IGHV3-7P01780 117 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 P04436 131 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 GDF1P27539 372 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 SRD5A2P31213 254 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 OPRK1P41145 380 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 CX3CL1P78423 397 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 CXorf67Q86X51 503 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms