RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 C1QL4Q86Z23 238 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 C1orf174Q8IYL3 243 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 COPS9Q8WXC6 57 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 SIGMAR1Q99720 223 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 WNK3Q9BYP7 1800 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 GPX4P36969 197 aaPredicted RBP15.91■□□□□ 0.14
SHANK3-203ENST00000445220 RAB1BQ9H0U4 201 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 IGKV1D-42A0A075B6H8 117 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 CD3EP07766 207 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 MPV17P39210 176 aa15.91■□□□□ 0.14
SHANK3-203ENST00000445220 A0A0J9YW62 118 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 ATG2BQ96BY7 2078 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 RBBP6Q7Z6E9 1792 aaKnown RBP15.9■□□□□ 0.14
SHANK3-203ENST00000445220 SPAARA0A1B0GVQ0 90 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 A0A1W2PRS3 328 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 MC5RP33032 325 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 STARD6P59095 220 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 MBNL2Q5VZF2 373 aaKnown RBP15.9■□□□□ 0.14
SHANK3-203ENST00000445220 TRAV9-2A0A087WT02 112 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 A0A1W2PRD5 423 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 A0A1W2PRF3 423 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 A0A1W2PRM7 423 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 MBD3L1Q8WWY6 194 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 SNAI3Q3KNW1 292 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 ASPHD2Q6ICH7 369 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 SLC25A28Q96A46 364 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 NUDT11Q96G61 164 aa15.9■□□□□ 0.14
SHANK3-203ENST00000445220 RRHO14718 337 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 ATP5IP56385 69 aaPredicted RBP15.89■□□□□ 0.13
SHANK3-203ENST00000445220 NR2C2APQ86WQ0 139 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 OR5A1Q8NGJ0 315 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 OR4A5Q8NH83 315 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 TMEM160Q9NX00 188 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 FOXD3Q9UJU5 478 aaPredicted RBP15.89■□□□□ 0.13
SHANK3-203ENST00000445220 DNAJC13O75165 2243 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 TBR1Q16650 682 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 ABHD12Q8N2K0 398 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 BEND2Q8NDZ0 799 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 UBTD1Q9HAC8 227 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 SMIM10L1P0DMW3 83 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 SCARF2Q96GP6 870 aaPredicted RBP15.89■□□□□ 0.13
SHANK3-203ENST00000445220 SMIM10Q96HG1 83 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 C17orf51A8MQB3 221 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 NPIPB6E9PJ23 425 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 NDUFS6O75380 124 aaKnown RBP15.89■□□□□ 0.13
SHANK3-203ENST00000445220 AGFG2O95081 481 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 UCP1P25874 307 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 CRYBA2P53672 197 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 LOXL4Q96JB6 756 aa15.89■□□□□ 0.13
SHANK3-203ENST00000445220 FAM90A27PA6NNH2 459 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 APOHP02749 345 aaPredicted RBP15.88■□□□□ 0.13
SHANK3-203ENST00000445220 CIRBPQ14011 172 aaKnown RBP15.88■□□□□ 0.13
SHANK3-203ENST00000445220 C2orf88Q9BSF0 95 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 BEX4Q9NWD9 120 aaPredicted RBP15.88■□□□□ 0.13
SHANK3-203ENST00000445220 PATE3B3GLJ2 98 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 CD5P06127 495 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 PRSS8Q16651 343 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 FAM53AQ6NSI3 398 aaPredicted RBP15.88■□□□□ 0.13
SHANK3-203ENST00000445220 SGK494Q96LW2 274 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 ZNF257Q9Y2Q1 563 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 IL6RP08887 468 aaPredicted RBP15.88■□□□□ 0.13
SHANK3-203ENST00000445220 RIPPLY3P57055 190 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 C3AR1Q16581 482 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 DRAM1Q8N682 238 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 IGKV3-7A0A075B6H7 116 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 EPOPA6NHQ4 379 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 A6NNC1 897 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 ATXN7O15265 892 aaPredicted RBP15.88■□□□□ 0.13
SHANK3-203ENST00000445220 ZIC3O60481 467 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 TNFSF13O75888 250 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 HTN1P15515 57 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 TFPI2P48307 235 aa15.88■□□□□ 0.13
SHANK3-203ENST00000445220 SPTA1P02549 2419 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 SCO2A0A1W2PP80 73 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 IGHMP01871 453 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 HCP5Q6MZN7 132 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 REG4Q9BYZ8 158 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 SLC25A10Q9UBX3 287 aaPredicted RBP15.87■□□□□ 0.13
SHANK3-203ENST00000445220 CABIN1Q9Y6J0 2220 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 ID1P41134 155 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 PSG9Q00887 426 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 TCF23Q7RTU1 214 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 GREB1LQ9C091 1923 aaPredicted RBP15.87■□□□□ 0.13
SHANK3-203ENST00000445220 ADMP35318 185 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 GFRA1P56159 465 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 LRTM2Q8N967 370 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 TM2D1Q9BX74 207 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 AMBPP02760 352 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 ATP5G3P48201 142 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 TM4SF20Q53R12 229 aa15.87■□□□□ 0.13
SHANK3-203ENST00000445220 TRBV24-1A0A075B6N3 115 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 IZUMO1RA6ND01 250 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 F2RL2O00254 374 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 FHL5Q5TD97 284 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 PRELID3AQ96N28 172 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 KLK15Q9H2R5 256 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 PARP14Q460N5 1801 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 PPIAL4DF5H284 164 aa15.86■□□□□ 0.13
SHANK3-203ENST00000445220 RABAC1Q9UI14 185 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms