RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 BLCAPP62952 87 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 C5orf64Q2M2E5 130 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
LIME1-202ENST00000444951 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 SELENOHQ8IZQ5 122 aaKnown RBP13.66□□□□□ -0.22
LIME1-202ENST00000444951 LGI3Q8N145 548 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 UXS1Q8NBZ7 420 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 MARVELD1Q9BSK0 173 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
LIME1-202ENST00000444951 TMEM140Q9NV12 185 aa13.66□□□□□ -0.22
LIME1-202ENST00000444951 M0QZK8 103 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 FCN1O00602 326 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 FGF16O43320 207 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 NDUFA3O95167 84 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 SPDEFO95238 335 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 CDS2O95674 445 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 DHFRP00374 187 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 AMY1AP04745 511 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 SRSF4Q08170 494 aaKnown RBP13.65□□□□□ -0.22
LIME1-202ENST00000444951 PJVKQ0ZLH3 352 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 IZUMO4Q1ZYL8 232 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 H2BFWTQ7Z2G1 175 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 FAM71E2Q8N5Q1 922 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
LIME1-202ENST00000444951 AIFM2Q9BRQ8 373 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 NPFFR1Q9GZQ6 430 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 ALX4Q9H161 411 aaPredicted RBP13.65□□□□□ -0.22
LIME1-202ENST00000444951 RANBP3Q9H6Z4 567 aaPredicted RBP13.65□□□□□ -0.22
LIME1-202ENST00000444951 SIGLEC9Q9Y336 463 aa13.65□□□□□ -0.22
LIME1-202ENST00000444951 WNK1Q9H4A3 2382 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 OR2A4O95047 310 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 IGKV1-5P01602 117 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 MECP2P51608 486 aaKnown RBP13.64□□□□□ -0.23
LIME1-202ENST00000444951 SRPXP78539 464 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 Q6ZS46 218 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 LYZL2Q7Z4W2 148 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 SLC35G3Q8N808 338 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 COQ8AQ8NI60 647 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
LIME1-202ENST00000444951 RRNAD1Q96FB5 475 aaKnown RBP13.64□□□□□ -0.23
LIME1-202ENST00000444951 SEC22AQ96IW7 307 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 TMEM56-RWDD3S4R434 201 aa13.64□□□□□ -0.23
LIME1-202ENST00000444951 VWFP04275 2813 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 ATG12O94817 140 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 KBTBD11O94819 623 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
LIME1-202ENST00000444951 CA2P00918 260 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 IL5P05113 134 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 CRYGBP07316 175 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 HOXB5P09067 269 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 OXA1LQ15070 435 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 PPP1R27Q86WC6 154 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
LIME1-202ENST00000444951 VSTM2AQ8TAG5 236 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 ABHD5Q8WTS1 349 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 HSPB9Q9BQS6 159 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 PRSS22Q9GZN4 317 aa13.63□□□□□ -0.23
LIME1-202ENST00000444951 ZNF430Q9H8G1 570 aaPredicted RBP13.63□□□□□ -0.23
LIME1-202ENST00000444951 GPN1Q9HCN4 374 aaPredicted RBP13.63□□□□□ -0.23
LIME1-202ENST00000444951 A0A0G2JRQ6 117 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
LIME1-202ENST00000444951 CNIH1O95406 144 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 OR9G9P0C7N8 305 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 RAG2P55895 527 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 OR2B8PP59922 312 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 RELBQ01201 579 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 TNXAQ16473 311 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 POU2AF1Q16633 256 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 PRSS8Q16651 343 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 TREML4Q6UXN2 200 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 PHB2Q99623 299 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 TGP01266 2768 aa13.62□□□□□ -0.23
LIME1-202ENST00000444951 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 UPK2O00526 184 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 CREBL2O60519 120 aaPredicted RBP13.61□□□□□ -0.23
LIME1-202ENST00000444951 PRAF2O60831 178 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 ADAP1O75689 374 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 SNAPC5O75971 98 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 ACTL6BO94805 426 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 OPN1MWP04001 364 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 OPN1MW2P0DN77 364 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 OPN1MW3P0DN78 364 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 MYOD1P15172 320 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 TATDN3Q17R31 274 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 TMEM95Q3KNT9 176 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 Q6ZSV7 163 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 C12orf45Q8N5I9 185 aaPredicted RBP13.61□□□□□ -0.23
LIME1-202ENST00000444951 GRPEL2Q8TAA5 225 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 TMEM167AQ8TBQ9 72 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 CHPT1Q8WUD6 406 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 MITD1Q8WV92 249 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 IL22RA2Q969J5 263 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 ZNF702PQ9H963 129 aa13.61□□□□□ -0.23
LIME1-202ENST00000444951 PARP11Q9NR21 331 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms