RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 NDUFA13Q9P0J0 144 aa8.09□□□□□ -1.11
HLA-DQB1-206ENST00000443574 KLK11Q9UBX7 282 aa8.09□□□□□ -1.11
HLA-DQB1-206ENST00000443574 NUBP2Q9Y5Y2 271 aa8.09□□□□□ -1.11
HLA-DQB1-206ENST00000443574 DPPA5A6NC42 116 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 FABP12A6NFH5 140 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 DISC1C4P0D8 188 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 M0QYG6 137 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ARPC1BO15143 372 aaKnown RBP8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RAB3DO95716 219 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TRGV3P03979 118 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 CD3DP04234 171 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 AKAIN1P0CW23 69 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PGAM2P15259 253 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 GNRHRP30968 328 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RAB9AP51151 201 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RAB25P57735 213 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TPPP2P59282 170 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 DGCR2P98153 550 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PJVKQ0ZLH3 352 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 C19orf54Q5BKX5 351 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 STEAP1BQ6NZ63 245 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 LCNL1Q6ZST4 164 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SLC25A42Q86VD7 318 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 CCDC71LQ8N9Z2 235 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TMEM167AQ8TBQ9 72 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 NXF2Q9GZY0 626 aaKnown RBP8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 HRASLSQ9HDD0 168 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 FAM212BQ9NTI7 297 aaPredicted RBP8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 BET1LQ9NYM9 111 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
HLA-DQB1-206ENST00000443574 A0A0G2JLM5 398 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 CCL24O00175 119 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RAMP3O60896 148 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 DHFRP00374 187 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 CD74P04233 296 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 FGF2P09038 288 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 OR8U8P0C7N1 319 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TNFSF8P32971 234 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 FAUP35544 74 aaKnown RBP8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PPP5CP53041 499 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 AP3S2P59780 193 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RPL8P62917 257 aaKnown RBP8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 POU2AF1Q16633 256 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SCGB2B2Q4G0G5 96 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PHLDA2Q53GA4 152 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SPANXN2Q5MJ10 180 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SSX9Q7RTT3 188 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PUSL1Q8N0Z8 303 aaKnown RBP8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 LINC00482Q8N8I6 264 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ZNF491Q8N8L2 437 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ZFAND1Q8TCF1 268 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 DGCR14Q96DF8 476 aaKnown RBP8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PRRT1Q99946 306 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RSRP1Q9BUV0 290 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TINAGL1Q9GZM7 467 aaPredicted RBP8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 COMMD5Q9GZQ3 224 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SLC2A9Q9NRM0 540 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 COA4Q9NYJ1 87 aa8.07□□□□□ -1.12
HLA-DQB1-206ENST00000443574 C13orf42A0A1B0GVH6 325 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 MARCH11A6NNE9 402 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 CYB5BO43169 146 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 GSTZ1O43708 216 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SOX15O60248 233 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PGLYRP1O75594 196 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ATG12O94817 140 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 S1PR2O95136 353 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 LGALS1P09382 135 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 OR9G9P0C7N8 305 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 PTBP1P26599 531 aaKnown RBP eCLIP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 RUNX1Q01196 453 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ZNF616Q08AN1 781 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SURF2Q15527 256 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 DEFB136Q30KP8 78 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 THOC7Q6I9Y2 204 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ETV3LQ6ZN32 361 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TBC1D26Q86UD7 250 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 LHFPL1Q86WI0 220 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 WFDC9Q8NEX5 89 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 P2RX4Q99571 388 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TSC22D3Q99576 134 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 TMEM140Q9NV12 185 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 COPZ2Q9P299 210 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 ZMAT5Q9UDW3 170 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 C14orf166Q9Y224 244 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 NOTCH3Q9UM47 2321 aa8.06□□□□□ -1.12
HLA-DQB1-206ENST00000443574 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
HLA-DQB1-206ENST00000443574 B3GALNT1O75752 331 aa8.05□□□□□ -1.12
HLA-DQB1-206ENST00000443574 SNAPC5O75971 98 aa8.05□□□□□ -1.12
HLA-DQB1-206ENST00000443574 BRI3O95415 125 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms