RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CDX1P47902 265 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-211ENST00000443563 INPP1P49441 399 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 PPP5CP53041 499 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 RPL23AP62750 156 aaKnown RBP8.49□□□□□ -1.05
HDAC6-211ENST00000443563 PJVKQ0ZLH3 352 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 POU2AF1Q16633 256 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 IDO2Q6ZQW0 420 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 LINC00299Q6ZSB3 139 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 TBC1D26Q86UD7 250 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 PUSL1Q8N0Z8 303 aaKnown RBP8.49□□□□□ -1.05
HDAC6-211ENST00000443563 CADM3Q8N126 398 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 LFNGQ8NES3 379 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 DMBX1Q8NFW5 382 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 FAM110DQ8TAY7 271 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-211ENST00000443563 TMEM167AQ8TBQ9 72 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 SPIN2AQ99865 258 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 SPIN2BQ9BPZ2 258 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 SLA2Q9H6Q3 261 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 ZNF430Q9H8G1 570 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-211ENST00000443563 SLC2A9Q9NRM0 540 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 SLC2A8Q9NY64 477 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 BET1LQ9NYM9 111 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 COPZ2Q9P299 210 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 C14orf166Q9Y224 244 aaKnown RBP8.49□□□□□ -1.05
HDAC6-211ENST00000443563 FBXO7Q9Y3I1 522 aa8.49□□□□□ -1.05
HDAC6-211ENST00000443563 A6NHS1 94 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 NUDT19A8MXV4 375 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 H3BUA1 57 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 ARPC1BO15143 372 aaKnown RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 MPPED1O15442 326 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 S1PR2O95136 353 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 RPLP1P05386 114 aaKnown RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 SERPINE2P07093 398 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 CTSDP07339 412 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 ZNF735P0CB33 412 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 EGR2P11161 476 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 RPA2P15927 270 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 LPAR6P43657 344 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 PIGPP57054 158 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 RPL8P62917 257 aaKnown RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 ZNF79Q15937 498 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 C19orf54Q5BKX5 351 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 OR4A47Q6IF82 309 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 FAAP20Q6NZ36 180 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 SSX9Q7RTT3 188 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 SLC25A42Q86VD7 318 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 ZNF695Q8IW36 515 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 VKORC1L1Q8N0U8 176 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 KLHL30-AS1Q8NEE0 82 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 MARCH1Q8TCQ1 289 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 SRSF12Q8WXF0 261 aaKnown RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 FAM103A1Q9BTL3 118 aaKnown RBP8.48□□□□□ -1.05
HDAC6-211ENST00000443563 HRASLSQ9HDD0 168 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 MCUBQ9NWR8 336 aa8.48□□□□□ -1.05
HDAC6-211ENST00000443563 MSGN1A6NI15 193 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 MARCH11A6NNE9 402 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 H0Y980 276 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 ATG12O94817 140 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 PF4P02776 101 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 RAB9AP51151 201 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 SSBP2P81877 361 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-211ENST00000443563 ZNF45Q02386 682 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 TRIQKQ629K1 86 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 HIST2H2BDQ6DRA6 164 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 OR51S1Q8NGJ8 323 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 OR13C8Q8NGS7 320 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 TRIM63Q969Q1 353 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 UBE2E2Q96LR5 201 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 TSC22D3Q99576 134 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 SRRQ9GZT4 340 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 VSIG4Q9Y279 399 aa8.47□□□□□ -1.05
HDAC6-211ENST00000443563 C3orf85A0A1B0GTC6 90 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 UPK2O00526 184 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 PLXNB1O43157 2135 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 SNAPC5O75971 98 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 BRI3O95415 125 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 KRASP01116 189 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 HLA-GP17693 338 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 PI3P19957 117 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 RPL27AP46776 148 aaKnown RBP8.46□□□□□ -1.06
HDAC6-211ENST00000443563 KLF9Q13886 244 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-211ENST00000443563 ZNF585BQ52M93 769 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 ZNF57Q68EA5 555 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-211ENST00000443563 ZNF491Q8N8L2 437 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 MYOZ3Q8TDC0 251 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 COMMD5Q9GZQ3 224 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 ZNF355PQ9NSJ1 428 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 TMEM140Q9NV12 185 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 GPR132Q9UNW8 380 aa8.46□□□□□ -1.06
HDAC6-211ENST00000443563 A0A0G2JLM5 398 aa8.45□□□□□ -1.06
HDAC6-211ENST00000443563 TEX13DA0A0J9YY54 714 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-211ENST00000443563 NAP1L6A6NFF2 107 aa8.45□□□□□ -1.06
HDAC6-211ENST00000443563 CENPXA8MT69 81 aa8.45□□□□□ -1.06
HDAC6-211ENST00000443563 SOX15O60248 233 aa8.45□□□□□ -1.06
HDAC6-211ENST00000443563 DHFRP00374 187 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms