RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TMEM167AQ8TBQ9 72 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 DEDD2Q8WXF8 326 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 ARPC1AQ92747 370 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 COMMD9Q9P000 198 aa12.56□□□□□ -0.4
USP39-205ENST00000442708 TRAV41A0A0B4J266 112 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 C3orf85A0A1B0GTC6 90 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 H0Y980 276 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 SOX15O60248 233 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 NQO2P16083 231 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 G6PCP35575 357 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 CCR6P51684 374 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 TNXAQ16473 311 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 ASPHD1Q5U4P2 390 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 LCNL1Q6ZST4 164 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 MINDY2Q8NBR6 621 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 SGMS2Q8NHU3 365 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 ABHD5Q8WTS1 349 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 S100ZQ8WXG8 99 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 FAM212BQ9NTI7 297 aaPredicted RBP12.55□□□□□ -0.4
USP39-205ENST00000442708 COPZ2Q9P299 210 aa12.55□□□□□ -0.4
USP39-205ENST00000442708 C14orf166Q9Y224 244 aaKnown RBP12.55□□□□□ -0.4
USP39-205ENST00000442708 A0A1B0GW64 132 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 E7EUB6 86 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 CNIH1O95406 144 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 KRASP01116 189 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 VDAC1P21796 283 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 INPP1P49441 399 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 LFNGQ8NES3 379 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 TMEM140Q9NV12 185 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
USP39-205ENST00000442708 CRYM-AS1A6NIL9 109 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 MARCH11A6NNE9 402 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 UPK2O00526 184 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 IGLV1-40P01703 118 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 IGHG4P01861 327 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 OR9G9P0C7N8 305 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 APELAP0DMC3 54 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 CD40LGP29965 261 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 SLC35B1P78383 322 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 UNQ5815/PRO19632Q6UWF5 114 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 MMD2Q8IY49 270 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 DMBX1Q8NFW5 382 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 VSTM2AQ8TAG5 236 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
USP39-205ENST00000442708 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 CCDC32Q9BV29 185 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 KLK15Q9H2R5 256 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 NAA60Q9H7X0 242 aa12.53□□□□□ -0.4
USP39-205ENST00000442708 TEX13DA0A0J9YY54 714 aaPredicted RBP12.52□□□□□ -0.41
USP39-205ENST00000442708 A0A1W2PN81 502 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 TCRBV4S1A1TA0A5B7 111 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 MSGN1A6NI15 193 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 CGB1A6NKQ9 187 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 RPLP1P05386 114 aaKnown RBP12.52□□□□□ -0.41
USP39-205ENST00000442708 SERPINE2P07093 398 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 UCP1P25874 307 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 PSMB8P28062 276 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 CHRNA7P36544 502 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 SUPT4H1P63272 117 aaKnown RBP12.52□□□□□ -0.41
USP39-205ENST00000442708 ZNF846Q147U1 533 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 NSUN5P1Q3KNT7 163 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 AKIRIN2Q53H80 203 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 TEX38Q6PEX7 206 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 C18orf65Q6ZTR6 163 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 OR4A5Q8NH83 315 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 CASTOR1Q8WTX7 329 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 AIFM2Q9BRQ8 373 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 GON7Q9BXV9 100 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 PRR13Q9NZ81 148 aa12.52□□□□□ -0.41
USP39-205ENST00000442708 NAP1L6A6NFF2 107 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 TSPAN15O95858 294 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 IGKV1-5P01602 117 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 OPN1MWP04001 364 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 P0C879 139 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 AKR1C4P17516 323 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 ERVK-16P61578 105 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
USP39-205ENST00000442708 IFITM3Q01628 133 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 FOXE3Q13461 319 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
USP39-205ENST00000442708 IZUMO4Q1ZYL8 232 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 NDUFA11Q86Y39 141 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 SLC25A21Q9BQT8 299 aaPredicted RBP12.51□□□□□ -0.41
USP39-205ENST00000442708 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
USP39-205ENST00000442708 TMEM222Q9H0R3 208 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 TBC1D24Q9ULP9 559 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms