RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 HES7Q9BYE0 225 aa16.93■□□□□ 0.3
SHOX2-203ENST00000441443 WDR83OSQ9Y284 106 aa16.93■□□□□ 0.3
SHOX2-203ENST00000441443 GVINP1Q7Z2Y8 2422 aa16.93■□□□□ 0.3
SHOX2-203ENST00000441443 CEBPDP49716 269 aaPredicted RBP16.92■□□□□ 0.3
SHOX2-203ENST00000441443 ZNF645Q8N7E2 425 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 OR52L2PQ8NGH6 319 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 MIC13Q5XKP0 118 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 MMD2Q8IY49 270 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 KCNE4Q8WWG9 221 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 UQCR10Q9UDW1 63 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 NAT8BQ9UHF3 227 aa16.92■□□□□ 0.3
SHOX2-203ENST00000441443 IGLC2P0DOY2 106 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 IGLC3P0DOY3 106 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 CYB561P49447 251 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 C6orf15Q6UXA7 325 aaPredicted RBP16.91■□□□□ 0.3
SHOX2-203ENST00000441443 MOB1BQ7L9L4 216 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 HINT1P49773 126 aaPredicted RBP16.91■□□□□ 0.3
SHOX2-203ENST00000441443 TNRC6AQ8NDV7 1962 aaKnown RBP16.91■□□□□ 0.3
SHOX2-203ENST00000441443 SPTBN2O15020 2390 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 HTD2P86397 168 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 MAJINQ3KP22 176 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 UNQ5815/PRO19632Q6UWF5 114 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 LINC00696Q6ZRV3 163 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 RAB1CQ92928 201 aa16.91■□□□□ 0.3
SHOX2-203ENST00000441443 NBEAQ8NFP9 2946 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 NEURL1O76050 574 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 RAC2P15153 192 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 RPP30P78346 268 aaKnown RBP16.9■□□□□ 0.3
SHOX2-203ENST00000441443 LEMD1Q68G75 181 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 FAM19A2Q8N3H0 131 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 APH1AQ96BI3 265 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 FAM166BA8MTA8 275 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 CELA3AP09093 270 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 RPEL1Q2QD12 228 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 UHRF2Q96PU4 802 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 CEP250Q9BV73 2442 aa16.9■□□□□ 0.3
SHOX2-203ENST00000441443 CLDN14O95500 239 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 HOXA4Q00056 320 aaPredicted RBP16.89■□□□□ 0.29
SHOX2-203ENST00000441443 PDLIM3Q53GG5 364 aaPredicted RBP16.89■□□□□ 0.29
SHOX2-203ENST00000441443 SSMEM1Q8WWF3 244 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 YLPM1P49750 1951 aaKnown RBP16.89■□□□□ 0.29
SHOX2-203ENST00000441443 A0A1W2PS18 150 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 ZNF253O75346 499 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 STAG3L2P0CL84 134 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 STAG3L3P0CL85 134 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 ZNF83P51522 516 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 C22orf15Q8WYQ4 148 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 PCNX2A6NKB5 2137 aa16.89■□□□□ 0.29
SHOX2-203ENST00000441443 OR5B21A6NL26 309 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 POM121L2Q96KW2 1035 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 MBNL3Q9NUK0 354 aaKnown RBP16.88■□□□□ 0.29
SHOX2-203ENST00000441443 CACNA1GO43497 2377 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 RIF1Q5UIP0 2472 aaKnown RBP16.88■□□□□ 0.29
SHOX2-203ENST00000441443 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 TCL1AP56279 114 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 SPATA31B1PQ5VZV4 182 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 TREML4Q6UXN2 200 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 VASH2Q86V25 355 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 TUSC5Q8IXB3 177 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 DSPP15924 2871 aaKnown RBP16.88■□□□□ 0.29
SHOX2-203ENST00000441443 A8MXE2 369 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 CXorf1O96002 111 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 C3orf79P0CE67 100 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 CATR1Q13166 79 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 WDR86Q86TI4 376 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 MPC1Q9Y5U8 109 aa16.88■□□□□ 0.29
SHOX2-203ENST00000441443 J3QT63 122 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 RAB29O14966 203 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 CYC1P08574 325 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 CEACAM8P31997 349 aaPredicted RBP16.87■□□□□ 0.29
SHOX2-203ENST00000441443 GALMQ96C23 342 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 MGST2Q99735 147 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 NKX6-3A6NJ46 265 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 LINC00473A8K010 186 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 SS18L1O75177 396 aaPredicted RBP16.87■□□□□ 0.29
SHOX2-203ENST00000441443 FOXH1O75593 365 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 NTF3P20783 257 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 FXYD3Q14802 87 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 TMEM249Q2WGJ8 235 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 ZNF718Q3SXZ3 478 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 ORAOV1Q8WV07 137 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 EAF1Q96JC9 268 aaPredicted RBP16.87■□□□□ 0.29
SHOX2-203ENST00000441443 V9GYV3 84 aa16.87■□□□□ 0.29
SHOX2-203ENST00000441443 C12orf77C9JDV5 145 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 CDIPTO14735 213 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 NXPH2O95156 264 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 LCN12Q6JVE5 192 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 GMPPAQ96IJ6 420 aaPredicted RBP16.86■□□□□ 0.29
SHOX2-203ENST00000441443 KCNS1Q96KK3 526 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 SFXN3Q9BWM7 321 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 MS4A5Q9H3V2 200 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 SEPSECSQ9HD40 501 aaKnown RBP16.86■□□□□ 0.29
SHOX2-203ENST00000441443 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
SHOX2-203ENST00000441443 IGHV3-43A0A0B4J1X8 118 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 DPRXA6NFQ7 191 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 TFF1P04155 84 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 IGHV3-43DP0DP04 118 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 GFRA1P56159 465 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 COTL1Q14019 142 aa16.86■□□□□ 0.29
SHOX2-203ENST00000441443 C3AR1Q16581 482 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms