RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 FBXL7Q9UJT9 491 aa15.68■□□□□ 0.1
CPNE1-219ENST00000440240 SPATA2Q9UM82 520 aa15.68■□□□□ 0.1
CPNE1-219ENST00000440240 DMRT1Q9Y5R6 373 aa15.68■□□□□ 0.1
CPNE1-219ENST00000440240 DNAH1Q9P2D7 4330 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 IGKV1D-13A0A0B4J2D9 117 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 SMIM30A4D0T7 59 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 TMEM235A6NFC5 223 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 C2orf70A6NJV1 201 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 TEX22C9J3V5 150 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 LGALS9O00182 355 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 HRASP01112 189 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 IGKV1-13P0DP09 117 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 FOLR2P14207 255 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 RPL27AP46776 148 aaKnown RBP15.67■□□□□ 0.1
CPNE1-219ENST00000440240 GABARAPL2P60520 117 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 UBE2UQ5VVX9 321 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 ZNF66Q6ZN08 573 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 GPHB5Q86YW7 130 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 PUSL1Q8N0Z8 303 aaKnown RBP15.67■□□□□ 0.1
CPNE1-219ENST00000440240 FYTTD1Q96QD9 318 aaKnown RBP15.67■□□□□ 0.1
CPNE1-219ENST00000440240 AIFM2Q9BRQ8 373 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 HIPK2Q9H2X6 1198 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 TXNL4BQ9NX01 149 aaKnown RBP15.67■□□□□ 0.1
CPNE1-219ENST00000440240 DAPK2Q9UIK4 370 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 RAB26Q9ULW5 256 aa15.67■□□□□ 0.1
CPNE1-219ENST00000440240 PPP5D1E7EU14 171 aa15.66■□□□□ 0.1
CPNE1-219ENST00000440240 OR2C1O95371 312 aa15.66■□□□□ 0.1
CPNE1-219ENST00000440240 IL6RP08887 468 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-219ENST00000440240 CD7P09564 240 aa15.66■□□□□ 0.1
CPNE1-219ENST00000440240 ZNF735P0CB33 412 aa15.66■□□□□ 0.1
CPNE1-219ENST00000440240 TAS2R8Q9NYW2 309 aa15.66■□□□□ 0.1
CPNE1-219ENST00000440240 OR11H12B2RN74 326 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 HLA-AP01891 365 aaKnown RBP15.65■□□□□ 0.1
CPNE1-219ENST00000440240 CRYGCP07315 174 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 EIF4EBP1Q13541 118 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-219ENST00000440240 GUCA2BQ16661 112 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 FAM106AQ4KMX7 169 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 DEFB125Q8N687 156 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 ZC4H2Q9NQZ6 224 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 SSR3Q9UNL2 185 aa15.65■□□□□ 0.1
CPNE1-219ENST00000440240 RRP15Q9Y3B9 282 aaKnown RBP15.65■□□□□ 0.1
CPNE1-219ENST00000440240 E7EUB6 86 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 SSX5O60225 188 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 HIST1H1BP16401 226 aaKnown RBP15.64■□□□□ 0.09
CPNE1-219ENST00000440240 CBLN1P23435 193 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 PSMB9P28065 219 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 BRWD1-AS2P59051 145 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 RPL8P62917 257 aaKnown RBP15.64■□□□□ 0.09
CPNE1-219ENST00000440240 MSMO1Q15800 293 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 FCGR1BQ92637 280 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 FANCD2OSQ96PS1 177 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 LYSTQ99698 3801 aa15.64■□□□□ 0.09
CPNE1-219ENST00000440240 NDUFB8O95169 186 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 PSMB6P28072 239 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 ARL3P36405 182 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 ARPC4P59998 168 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 KLK9Q2XQG4 91 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 SFXN4Q6P4A7 337 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 CLEC19AQ6UXS0 136 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 SLC16A13Q7RTY0 426 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 SPARTQ8N0X7 666 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 OR4A5Q8NH83 315 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 EEF1AKMT3Q96AZ1 226 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 RHBDL2Q9NX52 303 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 KLK9Q9UKQ9 250 aa15.63■□□□□ 0.09
CPNE1-219ENST00000440240 ZNF320A2RRD8 509 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 RBMY1BA6NDE4 496 aaKnown RBP15.62■□□□□ 0.09
CPNE1-219ENST00000440240 RBMY1EA6NEQ0 496 aaKnown RBP15.62■□□□□ 0.09
CPNE1-219ENST00000440240 RBMY1DP0C7P1 496 aaKnown RBP15.62■□□□□ 0.09
CPNE1-219ENST00000440240 DEFA4P12838 97 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 AREGP15514 252 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 CTRB1P17538 263 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 SCAND1P57086 179 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 CTRB2Q6GPI1 263 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 SSX9Q7RTT3 188 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 ZBTB34Q8NCN2 500 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 BEST4Q8NFU0 473 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 LGALS14Q8TCE9 139 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 WDR89Q96FK6 387 aaPredicted RBP15.62■□□□□ 0.09
CPNE1-219ENST00000440240 SRD5A3Q9H8P0 318 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 RETNQ9HD89 108 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 BET1LQ9NYM9 111 aa15.62■□□□□ 0.09
CPNE1-219ENST00000440240 A0A1B0GW64 132 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 JTBO76095 146 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 IGHV3-23P01764 117 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 HLA-GP17693 338 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 FCGR2CP31995 323 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 OR4A47Q6IF82 309 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 C19orf35Q6ZS72 473 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 SECTM1Q8WVN6 248 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 CXorf58Q96LI9 332 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 CCDC140Q96MF4 163 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 FAM110AQ9BQ89 295 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 CCL28Q9NRJ3 127 aa15.61■□□□□ 0.09
CPNE1-219ENST00000440240 EPPK1P58107 5090 aaKnown RBP15.61■□□□□ 0.09
CPNE1-219ENST00000440240 TRAV18A0A075B6X5 111 aa15.6■□□□□ 0.09
CPNE1-219ENST00000440240 TRBV7-1A0A0A6YYK4 115 aa15.6■□□□□ 0.09
CPNE1-219ENST00000440240 RBFOX2O43251 390 aaKnown RBP eCLIP15.6■□□□□ 0.093e-14■■■■■ 31.7
CPNE1-219ENST00000440240 SDC2P34741 201 aa15.6■□□□□ 0.09
CPNE1-219ENST00000440240 ANKRD55Q3KP44 614 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms