RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 Q3ZCU0 254 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF585BQ52M93 769 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 CXorf66Q5JRM2 361 aaPredicted RBP3.92□□□□□ -1.78
EDEM3-203ENST00000439962 WDR86Q86TI4 376 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 HSD17B11Q8NBQ5 300 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 RAB1CQ92928 201 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 C1orf159Q96HA4 380 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 NIPSNAP3BQ9BS92 247 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM147Q9BVK8 224 aa3.92□□□□□ -1.78
EDEM3-203ENST00000439962 SMCO3A2RU48 225 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 C9JQL5 133 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 C17orf112F2Z3M2 114 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TMPRSS2O15393 492 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 YPEL1O60688 119 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 IGHV3-13P01766 116 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 GYPAP02724 150 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 IGHV4-31P0DP07 118 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 PSG2P11465 335 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 MDKP21741 143 aaPredicted RBP3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TNFSF4P23510 183 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 GATA4P43694 442 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 AKR1C2P52895 323 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 AKR1C1Q04828 323 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TNFRSF9Q07011 255 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 ICAM4Q14773 271 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 PDCD1Q15116 288 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 BRICD5Q6PL45 260 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 LYPD2Q6UXB3 125 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 DRAM1Q8N682 238 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 GCSAMQ8N6F7 178 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 OR10A7Q8NGE5 316 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 RNASE11Q8TAA1 199 aaKnown RBP3.91□□□□□ -1.78
EDEM3-203ENST00000439962 SFT2D1Q8WV19 159 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 RDH5Q92781 318 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 BSCL2Q96G97 398 aaPredicted RBP3.91□□□□□ -1.78
EDEM3-203ENST00000439962 YPEL2Q96QA6 119 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 WDR61Q9GZS3 305 aaKnown RBP3.91□□□□□ -1.78
EDEM3-203ENST00000439962 MAGT1Q9H0U3 335 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 FAM234AQ9H0X4 552 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 SH3BGRL3Q9H299 93 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM231Q9H6L2 316 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 GCM1Q9NP62 436 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 RPS10P5Q9NQ39 176 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 OR14J1Q9UGF5 321 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 VAX2Q9UIW0 290 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 FBXO7Q9Y3I1 522 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 ARL2-SNX15V9GYD0 113 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 LRRC30A6NM36 301 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 F2RL2O00254 374 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 SPINT2O43291 252 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM50AO95807 157 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 IGKV1-39P01597 117 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 IGKV1-5P01602 117 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 IGHV2-5P01817 119 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 IGKV1D-39P04432 117 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 BCL2P10415 239 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 GABRA2P47869 451 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 CEBPDP49716 269 aaPredicted RBP3.91□□□□□ -1.78
EDEM3-203ENST00000439962 RAB7AP51149 207 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 ERVFRD-1P60508 538 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 UBE2KP61086 200 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 HABP2Q14520 560 aaPredicted RBP3.91□□□□□ -1.78
EDEM3-203ENST00000439962 FAM120AOSQ5T036 256 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 CYB5R2Q6BCY4 276 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM88Q6PEY1 159 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 HEPN1Q6WQI6 88 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 C11orf53Q8IXP5 236 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM190Q8WZ59 177 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TIMD4Q96H15 378 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 ADTRPQ96IZ2 230 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 SNX22Q96L94 193 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 MDFIQ99750 246 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 PCGF1Q9BSM1 259 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 LINC00574Q9H8X3 128 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM106BQ9NUM4 274 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 CACNG5Q9UF02 275 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 KCNS2Q9ULS6 477 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 VWFP04275 2813 aa3.91□□□□□ -1.78
EDEM3-203ENST00000439962 ELOA3CA0A087WX78 387 aaPredicted RBP3.9□□□□□ -1.78
EDEM3-203ENST00000439962 CTXND1A0A1B0GTU2 59 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF98A6NK75 572 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 SRRM5B3KS81 715 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 HSPB6O14558 160 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 MGST3O14880 152 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 NUPL2O15504 423 aaKnown RBP3.9□□□□□ -1.78
EDEM3-203ENST00000439962 RHBDL1O75783 438 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 VENTXO95231 258 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 AVPP01185 164 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 IRF2P14316 349 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 SRD5A1P18405 259 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 NFYBP25208 207 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 ZFP36P26651 326 aaKnown RBP3.9□□□□□ -1.78
EDEM3-203ENST00000439962 PPP1CCP36873 323 aaKnown RBP3.9□□□□□ -1.78
EDEM3-203ENST00000439962 CEACAM6P40199 344 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 GLIPR1P48060 266 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 MEOX2P50222 304 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 PPOXP50336 477 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 KRTAP1-1Q07627 177 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 EFNB3Q15768 340 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms