RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 SIRPDQ9H106 197 aa8.15□□□□□ -1.11
CBX5-202ENST00000439541 SLC35B3Q9H1N7 401 aa8.15□□□□□ -1.11
CBX5-202ENST00000439541 A0A087X0M5 115 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 A0A1B0GX30 115 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 C9JQL5 133 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 M0R1W7 72 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 PROP1O75360 226 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 S100A9P06702 114 aaKnown RBP8.14□□□□□ -1.11
CBX5-202ENST00000439541 MSMBP08118 114 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 GPR12P47775 334 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 RPL30P62888 115 aaKnown RBP8.14□□□□□ -1.11
CBX5-202ENST00000439541 DIAPH2-AS1Q14236 149 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 TMEM30BQ3MIR4 351 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 AWAT1Q58HT5 328 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 HCP5Q6MZN7 132 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 ZNF695Q8IW36 515 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 OR2C3Q8N628 320 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 TMEM56Q96MV1 263 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 TP53RKQ96S44 253 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 TBX15Q96SF7 602 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 RCL1Q9Y2P8 373 aaKnown RBP8.14□□□□□ -1.11
CBX5-202ENST00000439541 TMEM56-RWDD3S4R434 201 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 CR1P17927 2039 aa8.14□□□□□ -1.11
CBX5-202ENST00000439541 PRRC2AP48634 2157 aaKnown RBP8.14□□□□□ -1.11
CBX5-202ENST00000439541 ITPR3Q14573 2671 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 J3QR06 171 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 M0R036 132 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 M0R1X1 148 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 PITX3O75364 302 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 PGLYRP1O75594 196 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 RBP4P02753 201 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 SMIM6P0DI80 62 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 ZNF16P17020 682 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 HOXB4P17483 251 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 S100GP29377 79 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 NKX2-1P43699 371 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 REG1BP48304 166 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 EWSR1Q01844 656 aaKnown RBP eCLIP8.13□□□□□ -1.11
CBX5-202ENST00000439541 BAXQ07812 192 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 LDLRAD2Q5SZI1 272 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 PRSS57Q6UWY2 283 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 KIR3DL3Q8N743 410 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 SLC35G3Q8N808 338 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 C2CD4CQ8TF44 421 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 TNFRSF14Q92956 283 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 HIST1H2BAQ96A08 127 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 GNPNAT1Q96EK6 184 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 CLCC1Q96S66 551 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 CLEC7AQ9BXN2 247 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 WFDC1Q9HC57 220 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 POLR3KQ9Y2Y1 108 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 INSIG2Q9Y5U4 225 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 IGHV3OR16-10A0A075B7F0 116 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 LINC00473A8K010 186 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 TOX4O94842 621 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 SNRNP70P08621 437 aaKnown RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 RAB2AP61019 212 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 VAMP2P63027 116 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 EIF4EBP1Q13541 118 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 HABP2Q14520 560 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 CLINT1Q14677 625 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 CMTM1Q8IZ96 169 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 OR10X1Q8NGY0 326 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 OR9G1Q8NH87 305 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 IL22RA2Q969J5 263 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 MALSU1Q96EH3 234 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 ZNF251Q9BRH9 671 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 SCRT1Q9BWW7 348 aa8.13□□□□□ -1.11
CBX5-202ENST00000439541 LYRM2Q9NU23 88 aaPredicted RBP8.13□□□□□ -1.11
CBX5-202ENST00000439541 ZANQ9Y493 2812 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 CELSR1Q9NYQ6 3014 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 hCG_1809904A0A1W2PP81 198 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 A0A1W2PPE2 198 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 A0A1W2PR64 198 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 A0A1W2PRV1 198 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 B4DSR2 109 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 UBE2CO00762 179 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 ITGB1BP1O14713 200 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 SMAD7O15105 426 aaKnown RBP8.12□□□□□ -1.11
CBX5-202ENST00000439541 IGLV1-47P01700 117 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 IGHV4-31P0DP07 118 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 VDAC1P21796 283 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 PRTN3P24158 256 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 RAB7AP51149 207 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 B2MP61769 119 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 NHLH2Q02577 135 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 TMEM249Q2WGJ8 235 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 HLA-DRB5Q30154 266 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 AKIRIN2Q53H80 203 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 DPPA3Q6W0C5 159 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 OR4P4Q8NGL7 312 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 FAM213BQ8TBF2 198 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 TCTEX1D2Q8WW35 142 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 LHX4Q969G2 390 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 FOXC2Q99958 501 aa8.12□□□□□ -1.11
CBX5-202ENST00000439541 MRPL20Q9BYC9 149 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms