RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 C2orf50Q96LR7 162 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 CACNG5Q9UF02 275 aa16.55■□□□□ 0.24
CHD3-204ENST00000439235 A6NDX4 124 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 MPTX1A8MV57 137 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 OR2F2O95006 317 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 SIX6O95475 246 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 IGHV4-59P01825 116 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 OR9G9P0C7N8 305 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 CXCL3P19876 107 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 KRTAP21-3Q3LHN1 58 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 FBLN7Q53RD9 439 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 Q71RC1 249 aaPredicted RBP16.54■□□□□ 0.24
CHD3-204ENST00000439235 C16orf82Q7Z2V1 217 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 SIGLECL1Q8N7X8 197 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 OR4A16Q8NH70 328 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 TMEM167AQ8TBQ9 72 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 ASB13Q8WXK3 278 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 RBM14Q96PK6 669 aaKnown RBP16.54■□□□□ 0.24
CHD3-204ENST00000439235 SLC25A33Q9BSK2 321 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 RANBP3Q9H6Z4 567 aaPredicted RBP16.54■□□□□ 0.24
CHD3-204ENST00000439235 COA4Q9NYJ1 87 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 METTL1Q9UBP6 276 aaKnown RBP16.54■□□□□ 0.24
CHD3-204ENST00000439235 MOB4Q9Y3A3 225 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 CELSR1Q9NYQ6 3014 aa16.54■□□□□ 0.24
CHD3-204ENST00000439235 NCBP2LA6PVI3 153 aaKnown RBP16.53■□□□□ 0.24
CHD3-204ENST00000439235 INAFM1C9JVW0 142 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 UPK2O00526 184 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 RBMXL2O75526 392 aaKnown RBP16.53■□□□□ 0.24
CHD3-204ENST00000439235 CRYGBP07316 175 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 FGF2P09038 288 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 CYCSP99999 105 aaKnown RBP16.53■□□□□ 0.24
CHD3-204ENST00000439235 LY6EQ16553 131 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 FOXRED2Q8IWF2 684 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 ZBTB8BQ8NAP8 495 aaPredicted RBP16.53■□□□□ 0.24
CHD3-204ENST00000439235 OR1S1Q8NH92 325 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 OR10C1Q96KK4 312 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 ZNF436Q9C0F3 470 aaPredicted RBP16.53■□□□□ 0.24
CHD3-204ENST00000439235 FBXL15Q9H469 300 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 PRNDQ9UKY0 176 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 SIGLEC9Q9Y336 463 aa16.53■□□□□ 0.24
CHD3-204ENST00000439235 IL6RP08887 468 aaPredicted RBP16.52■□□□□ 0.24
CHD3-204ENST00000439235 GIPP09681 153 aaPredicted RBP16.52■□□□□ 0.24
CHD3-204ENST00000439235 F2RL1P55085 397 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 H2BFSP57053 126 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 RELBQ01201 579 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 IZUMO4Q1ZYL8 232 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 C5orf64Q2M2E5 130 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 TMEM86BQ8N661 226 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 PLSCR3Q9NRY6 295 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.52■□□□□ 0.24
CHD3-204ENST00000439235 CACFD1Q9UGQ2 172 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 VPREB3Q9UKI3 123 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 POMT1Q9Y6A1 747 aa16.52■□□□□ 0.24
CHD3-204ENST00000439235 CSPG4Q6UVK1 2322 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 HIVEP1P15822 2718 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 C15orf61A6NNL5 157 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 M0QZK8 103 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 HOXA3O43365 443 aaPredicted RBP16.51■□□□□ 0.23
CHD3-204ENST00000439235 Q6ZRM9 215 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 PPP1R27Q86WC6 154 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 TMEM219Q86XT9 240 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 MMD2Q8IY49 270 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 CHIAQ9BZP6 476 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 NMES1Q9C002 83 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 FKBP11Q9NYL4 201 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 GSKIPQ9P0R6 139 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 FOXA2Q9Y261 457 aaPredicted RBP16.51■□□□□ 0.23
CHD3-204ENST00000439235 ZNF469Q96JG9 3925 aaPredicted RBP16.51■□□□□ 0.23
CHD3-204ENST00000439235 ZANQ9Y493 2812 aa16.51■□□□□ 0.23
CHD3-204ENST00000439235 FGF16O43320 207 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 OR2B8PP59922 312 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 RPL8P62917 257 aaKnown RBP16.5■□□□□ 0.23
CHD3-204ENST00000439235 CD83Q01151 205 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 SRSF4Q08170 494 aaKnown RBP16.5■□□□□ 0.23
CHD3-204ENST00000439235 PRSS8Q16651 343 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 AKAP14Q86UN6 197 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 FAM71E2Q8N5Q1 922 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 Q8N9W7 124 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 OR4D5Q8NGN0 318 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 ZNF418Q8TF45 676 aaPredicted RBP16.5■□□□□ 0.23
CHD3-204ENST00000439235 RASL11BQ9BPW5 248 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 ZNF430Q9H8G1 570 aaPredicted RBP16.5■□□□□ 0.23
CHD3-204ENST00000439235 TPSG1Q9NRR2 321 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 NSG2Q9Y328 171 aa16.5■□□□□ 0.23
CHD3-204ENST00000439235 NF1P21359 2839 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 TRAV3A0A0B4J244 114 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 PITX3O75364 302 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 ACTL6BO94805 426 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 MAS1LP35410 378 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 RAP2BP61225 183 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 ZNF429Q86V71 674 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 TMEM14BQ9NUH8 114 aa16.49■□□□□ 0.23
CHD3-204ENST00000439235 FAM90A26D6RGX4 464 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 CCNKO75909 580 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 NKX2-1P43699 371 aaPredicted RBP16.48■□□□□ 0.23
CHD3-204ENST00000439235 AARDQ4LEZ3 155 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 C5orf56Q8N8D9 126 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 OR5B3Q8NH48 314 aa16.48■□□□□ 0.23
CHD3-204ENST00000439235 FYTTD1Q96QD9 318 aaKnown RBP16.48■□□□□ 0.23
CHD3-204ENST00000439235 CLCC1Q96S66 551 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms