RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 FAM214BQ7L5A3 538 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 MDP1Q86V88 176 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 G6PC2Q9NQR9 355 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 CCL21O00585 134 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 C2orf83Q53S99 150 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 C1orf185Q5T7R7 199 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 OR5A1Q8NGJ0 315 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 SERF1AO75920 110 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
TSC2-206ENST00000439117 MEGF9Q9H1U4 602 aa12.81□□□□□ -0.36
TSC2-206ENST00000439117 TRBV24-1A0A075B6N3 115 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 KLF4O43474 513 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 SRSF3P84103 164 aaKnown RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 ZDHHC16Q969W1 377 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 MRPL32Q9BYC8 188 aaKnown RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 AHRRA9YTQ3 701 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 EGR1P18146 543 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 GPX4P36969 197 aaPredicted RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 RTP5Q14D33 572 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 LY6G6FQ5SQ64 297 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 GATAD1Q8WUU5 269 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 C7orf71A4D174 169 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 CD5P06127 495 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 LGALS7P47929 136 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 ATP5IP56385 69 aaPredicted RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 HSPE1P61604 102 aaKnown RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 ZNF788Q6ZQV5 615 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 RNF126Q9BV68 326 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 CDX4O14627 284 aaPredicted RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 ZG16O60844 167 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 NDUFS6O75380 124 aaKnown RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 TNFSF13O75888 250 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 RPL23P62829 140 aaKnown RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
TSC2-206ENST00000439117 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 IMMP2LQ96T52 175 aa12.8□□□□□ -0.36
TSC2-206ENST00000439117 TRAV9-2A0A087WT02 112 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 TBX6O95947 436 aaPredicted RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 SNRPCP09234 159 aaKnown RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 TMPRSS3P57727 454 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 CDCP2Q5VXM1 449 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 RBPMS2Q6ZRY4 209 aaKnown RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 MRPL52Q86TS9 123 aaKnown RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 NEU1Q99519 415 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 DLL1O00548 723 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 SPINK2P20155 84 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 COX7A1P24310 79 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 GPR183P32249 361 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 P2RY6Q15077 328 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 ZNF658BQ4V348 819 aaPredicted RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 REG4Q9BYZ8 158 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 MS4A5Q9H3V2 200 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 PRR33A8MZF0 331 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 SSTR5P35346 364 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 SLC25A47Q6Q0C1 308 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 PPP1R32Q7Z5V6 425 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 MBD3L1Q8WWY6 194 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 C1RLQ9NZP8 487 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 FOXD3Q9UJU5 478 aaPredicted RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 MOGAT3Q86VF5 341 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
TSC2-206ENST00000439117 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
TSC2-206ENST00000439117 H3BUT2 72 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 MGST3O14880 152 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 ZNF441Q8N8Z8 693 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 GDF9O60383 454 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 PRSS2P07478 247 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 LGALS3P17931 250 aaKnown RBP12.78□□□□□ -0.36
TSC2-206ENST00000439117 ICAM4Q14773 271 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 C1orf194Q5T5A4 169 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 ZNF818PQ6ZRF7 136 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 TSPAN13O95857 204 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 FOXA3P55318 350 aaPredicted RBP12.78□□□□□ -0.36
TSC2-206ENST00000439117 TMEM105Q8N8V8 129 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 OR51G1Q8NGK1 321 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
TSC2-206ENST00000439117 UBTD1Q9HAC8 227 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 RELQ04864 619 aaPredicted RBP12.78□□□□□ -0.36
TSC2-206ENST00000439117 COPS9Q8WXC6 57 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 GTF3AQ92664 365 aaKnown RBP12.78□□□□□ -0.36
TSC2-206ENST00000439117 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
TSC2-206ENST00000439117 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 TMPRSS2O15393 492 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 PSG4Q00888 419 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 KCNMB1Q16558 191 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 PNKDQ8N490 385 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 ZNF488Q96MN9 340 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 INSIG2Q9Y5U4 225 aa12.77□□□□□ -0.36
TSC2-206ENST00000439117 MARCH11A6NNE9 402 aa12.77□□□□□ -0.37
TSC2-206ENST00000439117 AMBPP02760 352 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms