RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TMEM167AQ8TBQ9 72 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 DIRAS2Q96HU8 199 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 RSRP1Q9BUV0 290 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 C6orf62Q9GZU0 229 aaPredicted RBP10.26□□□□□ -0.77
LINC00399-201ENST00000439008 VSIG4Q9Y279 399 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 GABARAPH6UMI1 98 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 RBFOX2O43251 390 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINC00399-201ENST00000439008 OR2A4O95047 310 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 PRH1P02810 166 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 TRGV3P03979 118 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 CD74P04233 296 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
LINC00399-201ENST00000439008 KIR2DS2P43631 304 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 TPPP2P59282 170 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 TSPAN5P62079 268 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 ZNF45Q02386 682 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 POU2AF1Q16633 256 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 OR4A47Q6IF82 309 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 POC5Q8NA72 575 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 SMIM4Q8WVI0 70 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 FCAMRQ8WWV6 532 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 RCC1LQ96I51 464 aaKnown RBP10.25□□□□□ -0.77
LINC00399-201ENST00000439008 OR2A7Q96R45 310 aa10.25□□□□□ -0.77
LINC00399-201ENST00000439008 IGHV4OR15-8A0A075B7B6 117 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 A0A087WW49 117 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 GPR31O00270 319 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 PI3P19957 117 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 RAB25P57735 213 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 TMEM229BQ8NBD8 167 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 OR1N2Q8NGR9 330 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 MCFD2Q8NI22 146 aa10.24□□□□□ -0.77
LINC00399-201ENST00000439008 CTDSPLO15194 276 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 NOL3O60936 208 aaKnown RBP10.23□□□□□ -0.77
LINC00399-201ENST00000439008 HPRT1P00492 218 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 HRASP01112 189 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 LGALS1P09382 135 aaKnown RBP10.23□□□□□ -0.77
LINC00399-201ENST00000439008 AREGP15514 252 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 F2RP25116 425 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 LPAR6P43657 344 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 SLURP1P55000 103 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 UCP3P55916 312 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 CATR1Q13166 79 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 IL18Q14116 193 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 RNASE10Q5GAN6 216 aaKnown RBP10.23□□□□□ -0.77
LINC00399-201ENST00000439008 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 DLX4Q92988 240 aaPredicted RBP10.23□□□□□ -0.77
LINC00399-201ENST00000439008 DGCR14Q96DF8 476 aaKnown RBP10.23□□□□□ -0.77
LINC00399-201ENST00000439008 PLEKHA2Q9HB19 425 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 ZNF355PQ9NSJ1 428 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 AURKAIP1Q9NWT8 199 aaPredicted RBP10.23□□□□□ -0.77
LINC00399-201ENST00000439008 BET1LQ9NYM9 111 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 COL7A1Q02388 2944 aa10.23□□□□□ -0.77
LINC00399-201ENST00000439008 CCDC160A6NGH7 325 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 UPK2O00526 184 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 BRI3O95415 125 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 RAB3DO95716 219 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 TRBV12-3P01733 135 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 OR9G9P0C7N8 305 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 RPL27AP46776 148 aaKnown RBP10.22□□□□□ -0.77
LINC00399-201ENST00000439008 TAS2R31P59538 309 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 ZNF616Q08AN1 781 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 EGFEM1PQ0D2K5 195 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 STEAP1BQ6NZ63 245 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 TBC1D26Q86UD7 250 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 DCUN1D4Q92564 292 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 PHB2Q99623 299 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 SLA2Q9H6Q3 261 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 TMEM140Q9NV12 185 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 COA4Q9NYJ1 87 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 RSL24D1Q9UHA3 163 aaKnown RBP10.22□□□□□ -0.77
LINC00399-201ENST00000439008 V9GYH0 126 aa10.22□□□□□ -0.77
LINC00399-201ENST00000439008 TRBV9A0A0B4J1U6 114 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 DBX1A6NMT0 343 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 H3BUA1 57 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 GSTZ1O43708 216 aaPredicted RBP10.21□□□□□ -0.77
LINC00399-201ENST00000439008 NQO2P16083 231 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 HLA-GP17693 338 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 TBPP20226 339 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 G6PCP35575 357 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 PPP5CP53041 499 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 OR2B8PP59922 312 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 RPL8P62917 257 aaKnown RBP10.21□□□□□ -0.77
LINC00399-201ENST00000439008 ZNF79Q15937 498 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 SLC38A6Q8IZM9 456 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 ARRDC1Q8N5I2 433 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 TTC9CQ8N5M4 171 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 OR4C16Q8NGL9 310 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 TMEM68Q96MH6 324 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 FANCD2OSQ96PS1 177 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 FYTTD1Q96QD9 318 aaKnown RBP10.21□□□□□ -0.77
LINC00399-201ENST00000439008 SPIN2AQ99865 258 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 SPIN2BQ9BPZ2 258 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 HRASLSQ9HDD0 168 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 AKIP1Q9NQ31 210 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 SLC2A9Q9NRM0 540 aa10.21□□□□□ -0.77
LINC00399-201ENST00000439008 COMMD9Q9P000 198 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms