RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SPSB4Q96A44 273 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 ALKBH7Q9BT30 221 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-204ENST00000438964 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 GP6Q9HCN6 339 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 MYOD1P15172 320 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 GPR6P46095 362 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-204ENST00000438964 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 WDR86Q86TI4 376 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 GMPPAQ96IJ6 420 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-204ENST00000438964 PSG11Q9UQ72 335 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-204ENST00000438964 IGLV3-19P01714 112 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 OR10J4P0C629 311 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-204ENST00000438964 CRYBB3P26998 211 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 DUSP3P51452 185 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-204ENST00000438964 KRTAP27-1Q3LI81 207 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 OR4P4Q8NGL7 312 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 HES7Q9BYE0 225 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 STRADBQ9C0K7 418 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 HEYLQ9NQ87 328 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-204ENST00000438964 KCNIP2Q9NS61 270 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
ACTN1-204ENST00000438964 DPRXA6NFQ7 191 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-204ENST00000438964 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 H0Y8G0 127 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 TMPRSS2O15393 492 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 NEURL1O76050 574 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 MT-CO3P00414 261 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 GABRA2P47869 451 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 VAMP3Q15836 100 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 ACSF3Q4G176 576 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-204ENST00000438964 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 Q6P435 159 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 KIR3DL3Q8N743 410 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 RNF2Q99496 336 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 PRDM14Q9GZV8 571 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 TPRP12270 2363 aaKnown RBP11.15□□□□□ -0.62
ACTN1-204ENST00000438964 IGHV1-45A0A0A0MS14 117 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 A0A1W2PN81 502 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 FAM166BA8MTA8 275 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 C12orf77C9JDV5 145 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 RAC2P15153 192 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 CTRLP40313 264 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 LGALS4P56470 323 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 SELENOTP62341 195 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 RPEL1Q2QD12 228 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 MOB3BQ86TA1 216 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 Q8NFD4 153 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 OR4C5Q8NGB2 326 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 OR4B1Q8NGF8 309 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 MGST2Q99735 147 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 SSBP4Q9BWG4 385 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-204ENST00000438964 PHF7Q9BWX1 381 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-204ENST00000438964 ATMQ13315 3056 aa11.15□□□□□ -0.62
ACTN1-204ENST00000438964 TACC2O95359 2948 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A10PA6NDY2 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A18PA6NE21 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A16PA6NEW6 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A20PA6NIJ5 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A8PA6NJQ4 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A7PA6NKC0 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A22PA8MWA6 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A12PA8MX19 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A5PA8MXJ8 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A23PA8MXZ1 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A15PP0C7V4 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A13PP0C7W8 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A14PP0C7W9 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM90A24PP0C7X0 464 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 COX6A1P12074 109 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM216AQ8WUB2 273 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 SGK494Q96LW2 274 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 ZDBF2Q9HCK1 2354 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FCGR3BO75015 233 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 P04436 131 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 TREML4Q6UXN2 200 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 LOXL4Q96JB6 756 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 LINC00479Q96M42 142 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 CLEC7AQ9BXN2 247 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF391Q9UJN7 358 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FZR1Q9UM11 496 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 SLC45A2Q9UMX9 530 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 CELA3BP08861 270 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 GNG3P63215 75 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 EDDM3AQ14507 147 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 FAM168AQ92567 244 aa11.14□□□□□ -0.63
ACTN1-204ENST00000438964 TSPOP30536 169 aa11.13□□□□□ -0.63
ACTN1-204ENST00000438964 ZNF497Q6ZNH5 498 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms