RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OPRK1P41145 380 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 TCTAP57738 103 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 ARL2-SNX15V9GYD0 113 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 B9A039 149 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 GPR6P46095 362 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF474Q6S9Z5 364 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 VKORC1Q9BQB6 163 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 RFNGQ9Y644 331 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 ANKHD1Q8IWZ3 2542 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF503-AS2A6NEH8 195 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 C17orf100A8MU93 164 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 S1PR2O95136 353 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 GAPDHP04406 335 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 MPZP25189 248 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 TAS2R45P59539 299 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 DPPA3Q6W0C5 159 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 H1FOOQ8IZA3 346 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 SSMEM1Q8WWF3 244 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 NEIL1Q96FI4 390 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 C1orf147Q96MC9 270 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 PARP11Q9NR21 331 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 AMMECR1Q9Y4X0 333 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 C5orf52A6NGY3 159 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 UCP1P25874 307 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 BTNL8Q6UX41 500 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 LHFPL1Q86WI0 220 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 TCTEX1D1Q8N7M0 179 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 GTF3AQ92664 365 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 PAGE4O60829 102 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 CLN5O75503 358 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 WDR31Q8NA23 367 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 GGACTQ9BVM4 153 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 HES4Q9HCC6 221 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF331Q9NQX6 463 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 IDI2-AS1Q9NZ38 188 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 PRNDQ9UKY0 176 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 IGHV3-72A0A0B4J1Y9 119 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR10J4P0C629 311 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 TNXAQ16473 311 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR10G4Q8NGN3 311 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR10G9Q8NGN4 311 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR10G7Q8NGN6 311 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
TRAPPC9-202ENST00000438773 MARCH11A6NNE9 402 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 J3QR06 171 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 RND3P61587 244 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 IGFL3Q6UXB1 125 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 VAMP8Q9BV40 100 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 LPAR2Q9HBW0 351 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 CD5P06127 495 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 NPY1RP25929 384 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 CAMPP49913 170 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 C5orf24Q7Z6I8 188 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.85
TRAPPC9-202ENST00000438773 A0A0G2JNJ9 132 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 FCN1O00602 326 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 IGKV3-15P01624 115 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR10A7Q8NGE5 316 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR2T10Q8NGZ9 312 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR51M1Q9H341 326 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF586Q9NXT0 402 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 Q9UFV3 132 aa9.71□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF729A6NN14 1252 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 PSPNO60542 156 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 AMTP48728 403 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR5I1Q13606 314 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF497Q6ZNH5 498 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 VN1R17PQ8TDU5 208 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 PCGF1Q9BSM1 259 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 PITX3O75364 302 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR5B3Q8NH48 314 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 CBLN4Q9NTU7 201 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 COX7A2P2O60397 106 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 HSBP1O75506 76 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 CDC34P49427 236 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 TIGITQ495A1 244 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 RPL39P5Q59GN2 51 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 RNASE6Q93091 150 aaKnown RBP9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 A0A1W2PN81 502 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 J3QKU1 62 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF146Q15072 292 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 PRR30Q53SZ7 412 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 VKORC1L1Q8N0U8 176 aa9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 LYRM2Q9NU23 88 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC9-202ENST00000438773 NAPSAO96009 420 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 TRGC1P0CF51 173 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF600Q6ZNG1 722 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 ST6GALNAC3Q8NDV1 305 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR1L8Q8NGR8 309 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms