RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 C20orf173Q96LM9 149 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 NEURL2Q9BR09 285 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 ST6GALNAC5Q9BVH7 336 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 DUSP21Q9H596 190 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 ZNF430Q9H8G1 570 aaPredicted RBP5.9□□□□□ -1.46
VPS50-204ENST00000438395 EDA2RQ9HAV5 297 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 GAR1Q9NY12 217 aaKnown RBP5.9□□□□□ -1.46
VPS50-204ENST00000438395 ZNF257Q9Y2Q1 563 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 KCNK7Q9Y2U2 307 aa5.9□□□□□ -1.46
VPS50-204ENST00000438395 SRRM4A7MD48 611 aaKnown RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 BMPR1BO00238 502 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 GGCTO75223 188 aaKnown RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 OR2J3O76001 311 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 DEFA4P12838 97 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 HOXA5P20719 270 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 CRHBPP24387 322 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 RPL27AP46776 148 aaKnown RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 OR10A3P58181 314 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 GNG2P59768 71 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 SSBP2P81877 361 aaPredicted RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 SSX1Q16384 188 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 IL34Q6ZMJ4 242 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 FYTTD1Q96QD9 318 aaKnown RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 HSD17B10Q99714 261 aaKnown RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 FAM110AQ9BQ89 295 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 NDUFB11Q9NX14 153 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 TECRQ9NZ01 308 aaKnown RBP5.89□□□□□ -1.47
VPS50-204ENST00000438395 FBXL7Q9UJT9 491 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 OR2W1Q9Y3N9 320 aa5.89□□□□□ -1.47
VPS50-204ENST00000438395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.88□□□□□ -1.47
VPS50-204ENST00000438395 ZNF320A2RRD8 509 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 IZUMO1RA6ND01 250 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 LINC00473A8K010 186 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 RAB27BO00194 218 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 CYB5BO43169 146 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 HRASP01112 189 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 FOLR2P14207 255 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 NFYAP23511 347 aaPredicted RBP5.88□□□□□ -1.47
VPS50-204ENST00000438395 ARL3P36405 182 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 KIR2DS2P43631 304 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 ARPC4P59998 168 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 PLA2G7Q13093 441 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 ANKRD55Q3KP44 614 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 CDNFQ49AH0 187 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 FAM106AQ4KMX7 169 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 C10orf55Q5SWW7 151 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 C22orf42Q6IC83 251 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 OR4A47Q6IF82 309 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 IZUMO2Q6UXV1 221 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 Q6ZS49 121 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 DDB2Q92466 427 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 C5orf30Q96GV9 206 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 CNBD2Q96M20 576 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 OR2A7Q96R45 310 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 AIFM2Q9BRQ8 373 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 OR51E2Q9H255 320 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 DCSTAMPQ9H295 470 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 RETNQ9HD89 108 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 TAS2R8Q9NYW2 309 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 SPATA2Q9UM82 520 aa5.88□□□□□ -1.47
VPS50-204ENST00000438395 RBMX2Q9Y388 322 aaKnown RBP5.88□□□□□ -1.47
VPS50-204ENST00000438395 DYNC2H1Q8NCM8 4307 aaKnown RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 HUWE1Q7Z6Z7 4374 aaKnown RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 TRBV9A0A0B4J1U6 114 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 TRDV1A0A1B0GX56 115 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 SMIM30A4D0T7 59 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 C2orf70A6NJV1 201 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 OR11H12B2RN74 326 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 ANKRD65E5RJM6 399 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 PPP5D1E7EU14 171 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 KBTBD11O94819 623 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 HLA-AP01891 365 aaKnown RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 HIST1H1BP16401 226 aaKnown RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 PSMB9P28065 219 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 MAS1LP35410 378 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 RPL8P62917 257 aaKnown RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 ZNF45Q02386 682 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 HACD4Q5VWC8 232 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 SSX9Q7RTT3 188 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 VKORC1L1Q8N0U8 176 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 TTC9CQ8N5M4 171 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 DEFB125Q8N687 156 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 OR52B4Q8NGK2 314 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 NUDCD2Q8WVJ2 157 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 EEF1AKMT3Q96AZ1 226 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 THAP7Q9BT49 309 aaPredicted RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 HIPK2Q9H2X6 1198 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 HRASLSQ9HDD0 168 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 NKX1-2Q9UD57 310 aaPredicted RBP5.87□□□□□ -1.47
VPS50-204ENST00000438395 PLA2G2DQ9UNK4 145 aa5.87□□□□□ -1.47
VPS50-204ENST00000438395 BIRC6Q9NR09 4857 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 TMEM235A6NFC5 223 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 HMX3A6NHT5 357 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 LGALS9O00182 355 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 RBMXL2O75526 392 aaKnown RBP5.86□□□□□ -1.47
VPS50-204ENST00000438395 OR2C1O95371 312 aa5.86□□□□□ -1.47
VPS50-204ENST00000438395 HLA-DQB1P01920 261 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms