RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 AADACL3Q5VUY0 350 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 C11orf87Q6NUJ2 197 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 HAPLN4Q86UW8 402 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 ANKRD13BQ86YJ7 626 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 TMEM167AQ8TBQ9 72 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 USMG5Q96IX5 58 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 OR4C12Q96R67 309 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 B9D2Q9BPU9 175 aa14.06□□□□□ -0.16
HMGN1-207ENST00000436324 PEF1Q9UBV8 284 aaKnown RBP14.06□□□□□ -0.16
HMGN1-207ENST00000436324 FAM25AB3EWG3 89 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 FAM25CB3EWG5 89 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 FAM25GB3EWG6 89 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 E7EUB6 86 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 BRI3O95415 125 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 IL6RP08887 468 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-207ENST00000436324 NAT1P18440 290 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 ZP3P21754 424 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 GNRHRP30968 328 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 TAS2R46P59540 309 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 ZNF45Q02386 682 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 CTF1Q16619 201 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 ZNF343Q6P1L6 599 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 DHRS11Q6UWP2 260 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 C19orf35Q6ZS72 473 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 LYSMD2Q8IV50 215 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 TTC9CQ8N5M4 171 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 GPX8Q8TED1 209 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 RSRP1Q9BUV0 290 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 HRASLSQ9HDD0 168 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 AKIP1Q9NQ31 210 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 LSM4Q9Y4Z0 139 aaKnown RBP14.05□□□□□ -0.16
HMGN1-207ENST00000436324 TNCP24821 2201 aa14.05□□□□□ -0.16
HMGN1-207ENST00000436324 DPPA5A6NC42 116 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 TEX22C9J3V5 150 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 GABARAPO95166 117 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 RPA2P15927 270 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 SPNP16150 400 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 HRH1P35367 487 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 ATP5G2Q06055 141 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
HMGN1-207ENST00000436324 OR4A47Q6IF82 309 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 MZT2AQ6P582 158 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 MOB3AQ96BX8 217 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 CMTM3Q96MX0 182 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 ELOVL1Q9BW60 279 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 MRPS26Q9BYN8 205 aaKnown RBP14.04□□□□□ -0.16
HMGN1-207ENST00000436324 ADAM30Q9UKF2 790 aa14.04□□□□□ -0.16
HMGN1-207ENST00000436324 A0A1B0GW64 132 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 OR2J3O76001 311 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 HPRT1P00492 218 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 MAS1LP35410 378 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 SYNJ2BPP57105 145 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 RPL8P62917 257 aaKnown RBP14.03□□□□□ -0.16
HMGN1-207ENST00000436324 EXOSC2Q13868 293 aaKnown RBP14.03□□□□□ -0.16
HMGN1-207ENST00000436324 SLC25A42Q86VD7 318 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 OR6Q1Q8NGQ2 317 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 OR6F1Q8NGZ6 308 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 FXYD6Q9H0Q3 95 aa14.03□□□□□ -0.16
HMGN1-207ENST00000436324 TRAV3A0A0B4J244 114 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 FAM223BA6NKX1 122 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 RBFOX2O43251 390 aaKnown RBP eCLIP14.02□□□□□ -0.171e-18■□□□□ 8.3
HMGN1-207ENST00000436324 PGLYRP1O75594 196 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-207ENST00000436324 S1PR2O95136 353 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 RLN1P04808 185 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 HLA-GP17693 338 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 TAS2R31P59538 309 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 TSPAN5P62079 268 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 KLF5Q13887 457 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-207ENST00000436324 RPEL1Q2QD12 228 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 GPR141Q7Z602 305 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 FAM223AQ8IWN6 122 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 DMBX1Q8NFW5 382 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 BORCS5Q969J3 196 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 ASCL2Q99929 193 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 AIFM2Q9BRQ8 373 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 SCPEP1Q9HB40 452 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 BET1LQ9NYM9 111 aa14.02□□□□□ -0.17
HMGN1-207ENST00000436324 TRBV9A0A0B4J1U6 114 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 REG1AP05451 166 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 ZNF735P0CB33 412 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 GP9P14770 177 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 AREGP15514 252 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 NQO2P16083 231 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-207ENST00000436324 VAX1Q5SQQ9 334 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 OR4A5Q8NH83 315 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 AP3S1Q92572 193 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 SLC2A9Q9NRM0 540 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 ZNF257Q9Y2Q1 563 aa14.01□□□□□ -0.17
HMGN1-207ENST00000436324 UPK2O00526 184 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 RCVRNP35243 200 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 LPAR6P43657 344 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 ALDH3B2P48448 385 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 C15orf32Q32M92 178 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 PHLDA2Q53GA4 152 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 NECAP1Q8NC96 275 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 OR9G4Q8NGQ1 327 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 CD300LFQ8TDQ1 290 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 PLEKHA2Q9HB19 425 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 TMEM140Q9NV12 185 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms