RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 IGFBP7Q16270 282 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 OGFRL1Q5TC84 451 aaPredicted RBP3.24□□□□□ -1.89
USP54-206ENST00000433394 SDHAF4Q5VUM1 108 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 TRIQKQ629K1 86 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 LAIR2Q6ISS4 152 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 FAM45BPQ6NSW5 357 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 SPNS3Q6ZMD2 512 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 NIT1Q86X76 327 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 TRAPPC5Q8IUR0 188 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 HS3ST5Q8IZT8 346 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 MUC15Q8N387 334 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 RIBC1Q8N443 379 aaPredicted RBP3.24□□□□□ -1.89
USP54-206ENST00000433394 OR5K1Q8NHB7 308 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 AIF1LQ9BQI0 150 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 ZNF426Q9BUY5 554 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 SLC2A9Q9NRM0 540 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 TMEM216Q9P0N5 145 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 COQ4Q9Y3A0 265 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 FAM32AQ9Y421 112 aaKnown RBP3.24□□□□□ -1.89
USP54-206ENST00000433394 HTTP42858 3142 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 A0A0B4J2C4 111 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 DAPL1A0PJW8 107 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 F5H5T6 163 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 TMEM250H0YL14 139 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 C15orf65H3BRN8 121 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 M0QZK8 103 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 ACOX3O15254 700 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 CST8O60676 142 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 ATP6V1G2O95670 118 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 IGLV6-57P01721 117 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 FBP1P09467 338 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 INAFM2P0DMQ5 153 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 SMIM10L2AP0DMW4 78 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 SMIM10L2BP0DMW5 78 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 UCHL3P15374 230 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 CD34P28906 385 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 AP1S1P61966 158 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 CCL7P80098 99 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 IHHQ14623 411 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 RALGAPA2Q2PPJ7 1873 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 PDZD11Q5EBL8 140 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 TMED4Q7Z7H5 227 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 APOBEC3DQ96AK3 386 aaPredicted RBP3.23□□□□□ -1.89
USP54-206ENST00000433394 GALMQ96C23 342 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 RBP7Q96R05 134 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 PRSS27Q9BQR3 290 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 BABAM2Q9NXR7 383 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 MMACHCQ9Y4U1 282 aa3.23□□□□□ -1.89
USP54-206ENST00000433394 A6NED7 52 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 B4DEV8 164 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 KRT75O95678 551 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 ORM1P02763 201 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 IFNA16P05015 189 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 LINC00614P0C842 121 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 PSMA1P25786 263 aaKnown RBP3.22□□□□□ -1.89
USP54-206ENST00000433394 CASP1P29466 404 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 SLCO1A2P46721 670 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 RPL14P50914 215 aaKnown RBP3.22□□□□□ -1.89
USP54-206ENST00000433394 AESQ08117 197 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 ZNF235Q14590 738 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 DEFB134Q4QY38 66 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 SPIN3Q5JUX0 258 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 C4orf22Q6V702 233 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 TCF23Q7RTU1 214 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 TMEM251Q8N6I4 163 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 PIGXQ8TBF5 258 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 STACQ99469 402 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 PHB2Q99623 299 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 CCDC90BQ9GZT6 254 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 PCBD2Q9H0N5 130 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 C11orf49Q9H6J7 331 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 PLEKHJ1Q9NW61 149 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 MCTS1Q9ULC4 181 aaKnown RBP3.22□□□□□ -1.89
USP54-206ENST00000433394 GUCA1BQ9UMX6 200 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 ARL5AQ9Y689 179 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 VWA8A3KMH1 1905 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 CENPFP49454 3210 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 DNAH12Q6ZR08 3092 aa3.22□□□□□ -1.89
USP54-206ENST00000433394 PDCD11Q14690 1871 aaKnown RBP3.22□□□□□ -1.89
USP54-206ENST00000433394 H0Y980 276 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 EEF1E1O43324 174 aaKnown RBP3.21□□□□□ -1.9
USP54-206ENST00000433394 IFNA21P01568 189 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 GABRA1P14867 456 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 KCNE1P15382 129 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 SRP9P49458 86 aaKnown RBP3.21□□□□□ -1.9
USP54-206ENST00000433394 SULT1A2P50226 295 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 AP2S1P53680 142 aaPredicted RBP3.21□□□□□ -1.9
USP54-206ENST00000433394 OR4D2P58180 307 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 GABARAPL2P60520 117 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 ERVS71-1P61550 626 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 RPL19P84098 196 aaKnown RBP3.21□□□□□ -1.9
USP54-206ENST00000433394 TNFRSF9Q07011 255 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 ZNF141Q15928 474 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 MAPK14Q16539 360 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 CENPWQ5EE01 88 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 HENMT1Q5T8I9 393 aaKnown RBP3.21□□□□□ -1.9
USP54-206ENST00000433394 C3orf62Q6ZUJ4 267 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
USP54-206ENST00000433394 DHFR2Q86XF0 187 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms