RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 LPCAT4Q643R3 524 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 GLT8D1Q68CQ7 371 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 Q6ZSA8 131 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 RASSF6Q6ZTQ3 369 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 SPATA12Q7Z6I5 190 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 GPHB5Q86YW7 130 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 OR1L8Q8NGR8 309 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 RAB2BQ8WUD1 216 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 DNAJB3Q8WWF6 145 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 OPTNQ96CV9 577 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 MRPL32Q9BYC8 188 aaKnown RBP0.72□□□□□ -2.29
CDC40-204ENST00000431461 UPF3BQ9BZI7 483 aaKnown RBP0.72□□□□□ -2.29
CDC40-204ENST00000431461 DERL2Q9GZP9 239 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 IMP3Q9NV31 184 aaKnown RBP0.72□□□□□ -2.29
CDC40-204ENST00000431461 PRELID1Q9Y255 219 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 ANGPT4Q9Y264 503 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 C15orf41Q9Y2V0 281 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 LSM5Q9Y4Y9 91 aaKnown RBP0.72□□□□□ -2.29
CDC40-204ENST00000431461 COL4A1P02462 1669 aa0.72□□□□□ -2.29
CDC40-204ENST00000431461 ABCC12Q96J65 1359 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 PRRC2BQ5JSZ5 2229 aaKnown RBP0.71□□□□□ -2.3
CDC40-204ENST00000431461 TRAV38-1A0A0B4J264 116 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 IGKV3D-7A0A0C4DH55 119 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 IGKV3OR2-268A0A0C4DH90 116 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 FUOMA2VDF0 154 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 TRAPPC13A5PLN9 417 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 RFPL4AA6NLU0 287 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 RFPL4AL1F8VTS6 287 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 COX7A2LO14548 114 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 SLC22A1O15245 554 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 ACOX3O15254 700 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 ISG15P05161 165 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 RPSAP08865 295 aaKnown RBP0.71□□□□□ -2.3
CDC40-204ENST00000431461 CXCL2P19875 107 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 CXCL3P19876 107 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 CSN1S1P47710 185 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 AP2S1P53680 142 aaPredicted RBP0.71□□□□□ -2.3
CDC40-204ENST00000431461 UBE2G2P60604 165 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 IFITM2Q01629 132 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 EMX1Q04741 257 aaPredicted RBP0.71□□□□□ -2.3
CDC40-204ENST00000431461 DMTNQ08495 405 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 STX5Q13190 355 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 HES1Q14469 280 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 TPRXLQ17RH7 258 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 ACSM3Q53FZ2 586 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 UNQ6190/PRO20217Q6UXQ8 127 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 LRRC28Q86X40 367 aaPredicted RBP0.71□□□□□ -2.3
CDC40-204ENST00000431461 ASB17Q8WXJ9 295 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 ZNF625Q96I27 306 aaPredicted RBP0.71□□□□□ -2.3
CDC40-204ENST00000431461 HSPB9Q9BQS6 159 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 MAP1LC3AQ9H492 121 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 DCCP43146 1447 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 ARHGAP32A7KAX9 2087 aa0.71□□□□□ -2.3
CDC40-204ENST00000431461 NCKAP5O14513 1909 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 IGKV3-7A0A075B6H7 116 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 LINC00854A0A1B0GVQ3 168 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 MEIS3P1A6NDR6 274 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 OR51F1A6NGY5 319 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 F5H768 121 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 KCNK1O00180 336 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 SDCBPO00560 298 aaPredicted RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 NDUFS6O75380 124 aaKnown RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 HLA-DRAP01903 254 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 TYMSP04818 313 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 SRP19P09132 144 aaKnown RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 SULT1A3P0DMM9 295 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 SULT1A4P0DMN0 295 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 RPL12P30050 165 aaKnown RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 G6PCP35575 357 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 CCR2P41597 374 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 MARCKSL1P49006 195 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 RAB13P51153 203 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 CLDN12P56749 244 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 RAB5BP61020 215 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 RAB14P61106 215 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 RPL30P62888 115 aaKnown RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 SLC38A11Q08AI6 406 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 NNATQ16517 81 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 HIST3H3Q16695 136 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 CCDC122Q5T0U0 273 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 Q6ZRN7 208 aaPredicted RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 RIBC1Q8N443 379 aaPredicted RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 C12orf29Q8N999 325 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 OR2T27Q8NH04 317 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 OR52E6Q96RD3 313 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 NMNAT3Q96T66 252 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 MRPL57Q9BQC6 102 aaKnown RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 BBS2Q9BXC9 721 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 MRPS26Q9BYN8 205 aaKnown RBP0.7□□□□□ -2.3
CDC40-204ENST00000431461 HRASLSQ9HDD0 168 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 ATP6V1DQ9Y5K8 247 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 RGS12O14924 1447 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 KIF15Q9NS87 1388 aa0.7□□□□□ -2.3
CDC40-204ENST00000431461 TMED7-TICAM2A0A0A6YYA0 188 aa0.69□□□□□ -2.3
CDC40-204ENST00000431461 TRBV6-5A0A0K0K1A5 114 aa0.69□□□□□ -2.3
CDC40-204ENST00000431461 TRBV10-2A0A0K0K1G8 114 aa0.69□□□□□ -2.3
CDC40-204ENST00000431461 A0A1B0GVG6 124 aa0.69□□□□□ -2.3
CDC40-204ENST00000431461 C21orf140B9A014 251 aa0.69□□□□□ -2.3
CDC40-204ENST00000431461 GOLGA6L19H0YKK7 550 aa0.69□□□□□ -2.3
CDC40-204ENST00000431461 M0QZ92 97 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms