RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IFNA5P01569 189 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 AGAP20933 346 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 F2RL1P55085 397 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 HBG1P69891 147 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 HBG2P69892 147 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 DTX2Q86UW9 622 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 ABHD12Q8N2K0 398 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 OR13D1Q8NGV5 346 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 MS4A7Q9GZW8 240 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-203ENST00000431146 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
USHBP1-203ENST00000431146 SVEP1Q4LDE5 3571 aa13.59□□□□□ -0.23
USHBP1-203ENST00000431146 UTP20O75691 2785 aaKnown RBP13.59□□□□□ -0.23
USHBP1-203ENST00000431146 USP9XQ93008 2570 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-203ENST00000431146 DNASE2O00115 360 aaPredicted RBP13.58□□□□□ -0.23
USHBP1-203ENST00000431146 PRB1P04280 392 aa13.58□□□□□ -0.23
USHBP1-203ENST00000431146 TRBV23-1A0A0A0MS06 115 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 UBE2L5PA0A1B0GUS4 154 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 RTL8BQ17RB0 113 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 IL34Q6ZMJ4 242 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 OR8B3Q8NGG8 313 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 RAB39BQ96DA2 213 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 OR8B2Q96RD0 313 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 VPS13CQ709C8 3753 aa13.58□□□□□ -0.24
USHBP1-203ENST00000431146 MYO18BQ8IUG5 2567 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 FAM90A9PA6NNJ1 464 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 APOC3P02656 99 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 WDR25Q64LD2 544 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-203ENST00000431146 NEU4Q8WWR8 484 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-203ENST00000431146 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-203ENST00000431146 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-203ENST00000431146 TSNAXQ99598 290 aaKnown RBP13.57□□□□□ -0.24
USHBP1-203ENST00000431146 TMEM133Q9H2Q1 129 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 TREM1Q9NP99 234 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 PPIAL4CA0A0B4J2A2 164 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 TSPAN15O95858 294 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 PPIAL4GP0DN37 164 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 SPCS3P61009 180 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 AARDQ4LEZ3 155 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 OR9G1Q8NH87 305 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 NANPQ8TBE9 248 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 RAB1CQ92928 201 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 TIMD4Q96H15 378 aa13.57□□□□□ -0.24
USHBP1-203ENST00000431146 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 H0YJW9 148 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 FSTL3O95633 263 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 HRASP01112 189 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 OPN1MWP04001 364 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 FBP1P09467 338 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 OPN1MW2P0DN77 364 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 OPN1MW3P0DN78 364 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 RAB5CP51148 216 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 LYPD6BQ8NI32 183 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
USHBP1-203ENST00000431146 HEYLQ9NQ87 328 aaPredicted RBP13.56□□□□□ -0.24
USHBP1-203ENST00000431146 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 MLXQ9UH92 298 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 TCF19Q9Y242 345 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 MED13LQ71F56 2210 aa13.56□□□□□ -0.24
USHBP1-203ENST00000431146 C22orf46C9J442 243 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 RAB4BP61018 213 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 A0A087X0M5 115 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 A0A1B0GX30 115 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 TMEM218A2RU14 115 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 GPR37O15354 613 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 IFNA10P01566 189 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 S100A9P06702 114 aaKnown RBP13.55□□□□□ -0.24
USHBP1-203ENST00000431146 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 LINC00311Q8N616 119 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 OR10P1Q8NGE3 313 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 ZNF596Q8TC21 504 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 ST6GALNAC6Q969X2 333 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 NABP2Q9BQ15 211 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 HINT2Q9BX68 163 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 WDR61Q9GZS3 305 aaKnown RBP13.55□□□□□ -0.24
USHBP1-203ENST00000431146 VSIRQ9H7M9 311 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 ONECUT1Q9UBC0 465 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 CRYBG3Q68DQ2 2970 aa13.55□□□□□ -0.24
USHBP1-203ENST00000431146 IGHV2-26A0A0B4J1V2 119 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 A6NNC1 897 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 NUDT19A8MXV4 375 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 APOA2P02652 100 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 SAA1P0DJI8 122 aaPredicted RBP13.54□□□□□ -0.24
USHBP1-203ENST00000431146 IGFBP2P18065 325 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 COX7A1P24310 79 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 VDAC2P45880 294 aaPredicted RBP13.54□□□□□ -0.24
USHBP1-203ENST00000431146 AKR1C8PQ5T2L2 129 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 ZNF429Q86V71 674 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 OR5AN1Q8NGI8 311 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 TMEM186Q96B77 213 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 HARBI1Q96MB7 349 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 CHODLQ9H9P2 273 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 TMEM14BQ9NUH8 114 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 EPG5Q9HCE0 2579 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 IGHV3-72A0A0B4J1Y9 119 aa13.54□□□□□ -0.24
USHBP1-203ENST00000431146 UMAD1C9J7I0 102 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms