RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 C1orf87Q8N0U7 546 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 MALSU1Q96EH3 234 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 RHOVQ96L33 236 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 TMEM106BQ9NUM4 274 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 VAX2Q9UIW0 290 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 PPIAL4EA0A075B759 164 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 SEC14L6B5MCN3 397 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 PPIAL4DF5H284 164 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 PPIAL4FP0DN26 164 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 GNG10P50151 68 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
HOXC4-202ENST00000430889 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 HEPN1Q6WQI6 88 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 NEUROG1Q92886 237 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 ISOC2Q96AB3 205 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 NGBQ9NPG2 151 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 PPIAL4AQ9Y536 164 aa11.42□□□□□ -0.58
HOXC4-202ENST00000430889 ZFP92A6NM28 416 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 NDUFB7P17568 137 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 CD1BP29016 333 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 DLX6P56179 175 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 RPL31P62899 125 aaKnown RBP11.41□□□□□ -0.58
HOXC4-202ENST00000430889 DLK1P80370 383 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 TMEM249Q2WGJ8 235 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 OR10G9Q8NGN4 311 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 OR10G7Q8NGN6 311 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 LHX4Q969G2 390 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 TVP23CQ96ET8 276 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 GAL3ST2Q9H3Q3 398 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 KAAG1Q9UBP8 84 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 CTSZQ9UBR2 303 aa11.41□□□□□ -0.58
HOXC4-202ENST00000430889 MPDU1O75352 247 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 EIF3GO75821 320 aaKnown RBP eCLIP11.4□□□□□ -0.58
HOXC4-202ENST00000430889 AGAP20933 346 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 CA7P43166 264 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 UCNP55089 124 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 CD81P60033 236 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 ERVFRD-1P60508 538 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 HSPE1P61604 102 aaKnown RBP11.4□□□□□ -0.58
HOXC4-202ENST00000430889 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 C8orf31Q8N9H6 132 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 MAP1BP46821 2468 aaKnown RBP11.4□□□□□ -0.58
HOXC4-202ENST00000430889 POLEQ07864 2286 aa11.4□□□□□ -0.58
HOXC4-202ENST00000430889 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.58
HOXC4-202ENST00000430889 SRRM4A7MD48 611 aaKnown RBP11.4□□□□□ -0.59
HOXC4-202ENST00000430889 VSTM5A8MXK1 200 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 C17orf112F2Z3M2 114 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 SOX15O60248 233 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 HRASP01112 189 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 IFNA1P01562 189 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 CCL3L1P16619 93 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 LOXP28300 417 aaPredicted RBP11.4□□□□□ -0.59
HOXC4-202ENST00000430889 TREML4Q6UXN2 200 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 LINC00311Q8N616 119 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 ZNF714Q96N38 554 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.59
HOXC4-202ENST00000430889 HEYLQ9NQ87 328 aaPredicted RBP11.4□□□□□ -0.59
HOXC4-202ENST00000430889 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.59
HOXC4-202ENST00000430889 LSM4Q9Y4Z0 139 aaKnown RBP11.4□□□□□ -0.59
HOXC4-202ENST00000430889 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
HOXC4-202ENST00000430889 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 ADGRG4Q8IZF6 3080 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 UPK2O00526 184 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 YIF1AO95070 293 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 IFNA10P01566 189 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 ROS1P08922 2347 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 RAB5AP20339 215 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 APOBEC3AP31941 199 aaPredicted RBP11.39□□□□□ -0.59
HOXC4-202ENST00000430889 RAB11AP62491 216 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 HNF4GQ14541 408 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
HOXC4-202ENST00000430889 ABHD12Q8N2K0 398 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 OR13D1Q8NGV5 346 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 RAB1CQ92928 201 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 MS4A5Q9H3V2 200 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 SLC35D1Q9NTN3 355 aa11.39□□□□□ -0.59
HOXC4-202ENST00000430889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.38□□□□□ -0.59
HOXC4-202ENST00000430889 B4DEV8 164 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 SIAH2O43255 324 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 OR2C1O95371 312 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 TAGLN2P37802 199 aaKnown RBP11.38□□□□□ -0.59
HOXC4-202ENST00000430889 OPRK1P41145 380 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 ACOT6Q3I5F7 207 aaPredicted RBP11.38□□□□□ -0.59
HOXC4-202ENST00000430889 FAM71F2Q6NXP2 309 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 RBMS3Q6XE24 437 aaKnown RBP11.38□□□□□ -0.59
HOXC4-202ENST00000430889 FAM24BQ8N5W8 94 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 ZNF709Q8N972 641 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 CCL17Q92583 94 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 MGST2Q99735 147 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 GGTLC1Q9BX51 225 aa11.38□□□□□ -0.59
HOXC4-202ENST00000430889 TMPRSS5Q9H3S3 457 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms