RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TGIF2-C20orf24A0A0A6YYL0 155 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 GGTLC3B5MD39 225 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM178BH3BS89 294 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 I3L521 148 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 ALPLP05186 524 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SULT1A1P50225 295 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 POLR2GP62487 172 aaKnown RBP eCLIP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 FABP9Q0Z7S8 132 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PRR31Q5SQ13 230 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MBNL2Q5VZF2 373 aaKnown RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 ZNF818PQ6ZRF7 136 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NABP1Q96AH0 204 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TOMM7Q9P0U1 55 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MYH6P13533 1939 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NPIPB8E9PQR5 432 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NPIPB9F8W1W9 429 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 H3BP45 60 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NPIPB7O75200 414 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 CXorf1O96002 111 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PGA5P0DJD9 388 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 COTL1Q14019 142 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PVRIGQ6DKI7 326 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 LYPD4Q6UWN0 246 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 C1orf122Q6ZSJ8 110 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 BHLHA9Q7RTU4 235 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM219Q86XT9 240 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM183AQ8IXX5 376 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 ZNF502Q8TBZ5 544 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM190Q8WZ59 177 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TRAF4Q9BUZ4 470 aaPredicted RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 CDCA4Q9BXL8 241 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MANBALQ9NQG1 85 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PSORS1C1Q9UIG5 152 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RPUSD1Q9UJJ7 312 aaKnown RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PLXNB2O15031 1838 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TCRBV5S1A1TA0A578 114 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 ANKRD20A5PA0PJZ0 165 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 HRKO00198 91 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SIGLEC5O15389 551 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RAMP1O60894 148 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PPYP01298 95 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 NTF3P20783 257 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RNASE4P34096 147 aaKnown RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 UBE2BP63146 152 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RAE1P78406 368 aaKnown RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SS18Q15532 418 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 VWC2Q2TAL6 325 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MESTQ5EB52 335 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 DMRTA1Q5VZB9 504 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MORN3Q6PF18 240 aaPredicted RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MAVSQ7Z434 540 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 ZNRF1Q8ND25 227 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PARP12Q9H0J9 701 aaKnown RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM140Q9NV12 185 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PGPEP1Q9NXJ5 209 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TCRBV5S2A0A599 114 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RRHO14718 337 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 PEX11BO96011 259 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 DNAL4O96015 105 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 DAPP51397 102 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 ABLIM2Q6H8Q1 611 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 APCDD1LQ8NCL9 501 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 KNL1Q8NG31 2342 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 VWCEQ96DN2 955 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SLC2A9Q9NRM0 540 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SLC25A15Q9Y619 301 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 LOXHD1Q8IVV2 1947 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SPART-AS1P0CW21 52 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RNF224P0DH78 156 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SAA4P35542 130 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 MFAP2P55001 183 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RPL32P62910 135 aaKnown RBP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 SRSF9Q13242 221 aaKnown RBP eCLIP3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TMEM144Q7Z5S9 345 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 RARRES2Q99969 163 aa3.78□□□□□ -1.8
LRRK2-204ENST00000430804 TRAV21A0A0B4J279 112 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM250H0YL14 139 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 SCGB1D1O95968 90 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 CD7P09564 240 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 HKR1P10072 659 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 PSMB6P28072 239 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 HOXD3P31249 432 aaPredicted RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 TDGF1P3P51864 188 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 FOXL2P58012 376 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 OR8A1Q8NGG7 326 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 LPAR5Q9H1C0 372 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 ACACAQ13085 2346 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 TTC3P53804 2025 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV3-35A0A0C4DH35 117 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 CCL24O00175 119 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGF2P01344 180 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 PTHLHP12272 177 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 LRTM2Q8N967 370 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 OR11H1Q8NG94 326 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 OR11H2Q8NH07 326 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 OR10C1Q96KK4 312 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 MRPL32Q9BYC8 188 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms