RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 IGHV3-72A0A0B4J1Y9 119 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 CDC42EP2O14613 210 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 PLA2G10O15496 165 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 ZNF729A6NN14 1252 aaPredicted RBP14.18□□□□□ -0.14
RIF1-204ENST00000430328 ITGB1BP1O14713 200 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 CEACAM5P06731 702 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 TMEM174Q8WUU8 243 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 VSIG8P0DPA2 414 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 PRTN3P24158 256 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 MORN3Q6PF18 240 aaPredicted RBP14.18□□□□□ -0.14
RIF1-204ENST00000430328 FMC1Q96HJ9 113 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 ZNF71Q9NQZ8 489 aaPredicted RBP14.18□□□□□ -0.14
RIF1-204ENST00000430328 KIDINS220Q9ULH0 1771 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 ZNF818PQ6ZRF7 136 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 APCDD1LQ8NCL9 501 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 PDFQ9HBH1 243 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 TSPAN7P41732 249 aa14.18□□□□□ -0.14
RIF1-204ENST00000430328 A0A1B0GUL6 1792 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 ICAM4Q14773 271 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 RBMY1FQ15415 496 aaKnown RBP14.17□□□□□ -0.14
RIF1-204ENST00000430328 CENPVQ7Z7K6 275 aaPredicted RBP14.17□□□□□ -0.14
RIF1-204ENST00000430328 REG1AP05451 166 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 SRFP11831 508 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 POC1AQ8NBT0 407 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 LRRC61Q9BV99 259 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 F8WEM9 126 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 ERVK11-1P61568 191 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 C17orf99Q6UX52 265 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 PHF7Q9BWX1 381 aaPredicted RBP14.17□□□□□ -0.14
RIF1-204ENST00000430328 MPTX1A8MV57 137 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 GTSF1LQ9H1H1 148 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 SCN4AP35499 1836 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 CXorf66Q5JRM2 361 aaPredicted RBP14.17□□□□□ -0.14
RIF1-204ENST00000430328 EPDR1Q9UM22 224 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 TRGV2A0A075B6R0 118 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 ODAMA1E959 279 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 FGF12P61328 243 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 RPRMQ9NS64 109 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 ST6GALNAC2Q9UJ37 374 aa14.17□□□□□ -0.14
RIF1-204ENST00000430328 LIPT2A6NK58 231 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 MGST3O14880 152 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 GLULP15104 373 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 ZNF146Q15072 292 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 CEACAM21Q3KPI0 293 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 HIKESHIQ53FT3 197 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 RBM38Q9H0Z9 239 aaKnown RBP14.16□□□□□ -0.14
RIF1-204ENST00000430328 TRAV9-1A0A075B6T8 112 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 FUT5Q11128 374 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 C16orf97H3BN30 126 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 UNQ9370/PRO34162Q6UXP9 181 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 SFXN3Q9BWM7 321 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 ESDP10768 282 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 HSPE1P61604 102 aaKnown RBP14.16□□□□□ -0.14
RIF1-204ENST00000430328 C2orf68Q2NKX9 166 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 MON2Q7Z3U7 1717 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 MARCH11A6NNE9 402 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 PAX1P15863 534 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 GCHFRP30047 84 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 PCSK4Q6UW60 755 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 SHISA4Q96DD7 197 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 DDX60Q8IY21 1712 aaKnown RBP14.16□□□□□ -0.14
RIF1-204ENST00000430328 JMJD8Q96S16 334 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 NDUFAF3Q9BU61 184 aa14.16□□□□□ -0.14
RIF1-204ENST00000430328 BGLAPP02818 100 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 UCP3P55916 312 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 SIRT4Q9Y6E7 314 aaPredicted RBP14.15□□□□□ -0.14
RIF1-204ENST00000430328 LINC00158P58513 81 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 PMS2CLQ68D20 193 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 MPV17P39210 176 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 SRSF1Q07955 248 aaKnown RBP eCLIP14.15□□□□□ -0.14
RIF1-204ENST00000430328 FER1L6-AS1Q8NA97 138 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 LTBP3Q9NS15 1303 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 TIAM2Q8IVF5 1701 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 MYOM1P52179 1685 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 TRBV5-4A0A0C4DH59 114 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 C2orf82Q6UX34 121 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 TDHQ8IZJ6 230 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 CALYQ9NYX4 217 aa14.15□□□□□ -0.14
RIF1-204ENST00000430328 DTX2Q86UW9 622 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 LINC00587B1AMM8 73 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 SCTP09683 121 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 CD69Q07108 199 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 LOXL4Q96JB6 756 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 ST20Q9HBF5 79 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 SERGEFQ9UGK8 458 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 HIGD1CA8MV81 97 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 OR11H4Q8NGC9 324 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 TMEM238C9JI98 176 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 H3BTX0 84 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 SPINK8P0C7L1 97 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 ATP5IP56385 69 aaPredicted RBP14.14□□□□□ -0.15
RIF1-204ENST00000430328 HSD52Q0P140 79 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 RTN4RL2Q86UN3 420 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 RPP21Q9H633 154 aaKnown RBP14.14□□□□□ -0.15
RIF1-204ENST00000430328 EDIL3O43854 480 aa14.14□□□□□ -0.15
RIF1-204ENST00000430328 RNASE4P34096 147 aaKnown RBP14.13□□□□□ -0.15
RIF1-204ENST00000430328 GATAD1Q8WUU5 269 aa14.13□□□□□ -0.15
RIF1-204ENST00000430328 ITLN2Q8WWU7 325 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms