RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 J3QRK9 145 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 JTBO76095 146 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 GNG2P59768 71 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 RPL30P62888 115 aaKnown RBP11.24□□□□□ -0.61
MSH5-208ENST00000429846 EIF4EBP1Q13541 118 aaPredicted RBP11.24□□□□□ -0.61
MSH5-208ENST00000429846 ZNF66Q6ZN08 573 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 TPRA1Q86W33 373 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 NUDCD2Q8WVJ2 157 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 FBXL7Q9UJT9 491 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 HMX3A6NHT5 357 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 A8MWP6 167 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 HRASP01112 189 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 CRYGCP07315 174 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 CD7P09564 240 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 ZNF735P0CB33 412 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 FOLR2P14207 255 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
MSH5-208ENST00000429846 ARL3P36405 182 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 MSMO1Q15800 293 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 KLK9Q2XQG4 91 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 SLC16A13Q7RTY0 426 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 FYTTD1Q96QD9 318 aaKnown RBP11.23□□□□□ -0.61
MSH5-208ENST00000429846 AIFM2Q9BRQ8 373 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 RETNQ9HD89 108 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 TXNL4BQ9NX01 149 aaKnown RBP11.23□□□□□ -0.61
MSH5-208ENST00000429846 KLK9Q9UKQ9 250 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 RAB26Q9ULW5 256 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
MSH5-208ENST00000429846 OR11H12B2RN74 326 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
MSH5-208ENST00000429846 PSMB6P28072 239 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 SCAND1P57086 179 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 RPL8P62917 257 aaKnown RBP11.22□□□□□ -0.61
MSH5-208ENST00000429846 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 UBE2UQ5VVX9 321 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 OR4A5Q8NH83 315 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 FCGR1BQ92637 280 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 EEF1AKMT3Q96AZ1 226 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
MSH5-208ENST00000429846 SMIM30A4D0T7 59 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 OR2C1O95371 312 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 HLA-AP01891 365 aaKnown RBP11.21□□□□□ -0.61
MSH5-208ENST00000429846 CTRB1P17538 263 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 CBLN1P23435 193 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 CTRB2Q6GPI1 263 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 SFXN4Q6P4A7 337 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 DEFB125Q8N687 156 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 ZBTB34Q8NCN2 500 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 LGALS14Q8TCE9 139 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 WDR89Q96FK6 387 aaPredicted RBP11.21□□□□□ -0.61
MSH5-208ENST00000429846 CXorf58Q96LI9 332 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 FANCD2OSQ96PS1 177 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 BET1LQ9NYM9 111 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 TAS2R8Q9NYW2 309 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 DAPK2Q9UIK4 370 aa11.21□□□□□ -0.61
MSH5-208ENST00000429846 SACSQ9NZJ4 4579 aa11.21□□□□□ -0.62
MSH5-208ENST00000429846 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 A0A1B0GW64 132 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 RBMY1BA6NDE4 496 aaKnown RBP11.2□□□□□ -0.62
MSH5-208ENST00000429846 RBMY1EA6NEQ0 496 aaKnown RBP11.2□□□□□ -0.62
MSH5-208ENST00000429846 E7EUB6 86 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 RBFOX2O43251 390 aaKnown RBP eCLIP11.2□□□□□ -0.62
MSH5-208ENST00000429846 SSX5O60225 188 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 FGF2P09038 288 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 RBMY1DP0C7P1 496 aaKnown RBP11.2□□□□□ -0.62
MSH5-208ENST00000429846 AREGP15514 252 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 PSMB9P28065 219 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 BRWD1-AS2P59051 145 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 ARPC4P59998 168 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 TIMM50Q3ZCQ8 353 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 ZNF57Q68EA5 555 aaPredicted RBP11.2□□□□□ -0.62
MSH5-208ENST00000429846 CLEC19AQ6UXS0 136 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 BEST4Q8NFU0 473 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 RHBDL2Q9NX52 303 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
MSH5-208ENST00000429846 IGLV11-55A0A075B6I3 123 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 A0A0A6YYH2 397 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 TMEM213A2RRL7 107 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 A6NJ64 397 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 NDUFB8O95169 186 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 DEFA4P12838 97 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 HLA-GP17693 338 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 CATR1Q13166 79 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 ANKRD55Q3KP44 614 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 SSX9Q7RTT3 188 aa11.19□□□□□ -0.62
MSH5-208ENST00000429846 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms