RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 R3HDM4Q96D70 268 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 TSC22D3Q99576 134 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM222Q9H0R3 208 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 NAA60Q9H7X0 242 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 VSIG4Q9Y279 399 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 TEX13DA0A0J9YY54 714 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-204ENST00000429629 PSMB11A5LHX3 300 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 MARCH11A6NNE9 402 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 HAX1O00165 279 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 UPK2O00526 184 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 LYRM1O43325 122 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 UPK1BO75841 260 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 ACTL6BO94805 426 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 IGHG4P01861 327 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 ELANEP08246 267 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 VDAC1P21796 283 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-204ENST00000429629 CD83Q01151 205 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 TEX38Q6PEX7 206 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 OR5AU1Q8NGC0 362 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 GLYATL2Q8WU03 294 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 ARPC1AQ92747 370 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 IL22RA2Q969J5 263 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM56Q96MV1 263 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 TP53RKQ96S44 253 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-204ENST00000429629 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-204ENST00000429629 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM56-RWDD3S4R434 201 aa11.76□□□□□ -0.53
GARNL3-204ENST00000429629 TRAV41A0A0B4J266 112 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 ARPC1BO15143 372 aaKnown RBP11.75□□□□□ -0.53
GARNL3-204ENST00000429629 ATP6V0E1O15342 81 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 CNIH1O95406 144 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 ANXA3P12429 323 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 SLC6A1P30531 599 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 BTCP35070 178 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 KRTAP10-3P60369 221 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 RPL8P62917 257 aaKnown RBP11.75□□□□□ -0.53
GARNL3-204ENST00000429629 NDPQ00604 133 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 PJVKQ0ZLH3 352 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 FOXE3Q13461 319 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 ASAH1Q13510 395 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM95Q3KNT9 176 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM230Q96A57 120 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-204ENST00000429629 CLCC1Q96S66 551 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 SPIN2AQ99865 258 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 SPIN2BQ9BPZ2 258 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 SRSF8Q9BRL6 282 aaKnown RBP11.75□□□□□ -0.53
GARNL3-204ENST00000429629 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
GARNL3-204ENST00000429629 KRASP01116 189 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 IGLV1-40P01703 118 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 SRPXP78539 464 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 THOC7Q6I9Y2 204 aaKnown RBP11.74□□□□□ -0.53
GARNL3-204ENST00000429629 MZT2BQ6NZ67 158 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 FAM219AQ8IW50 185 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 OR5M8Q8NGP6 311 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
GARNL3-204ENST00000429629 H3BUA1 57 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 FBXO24O75426 580 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 SNAPC5O75971 98 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 OPN1MWP04001 364 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 OR5AC1P0C628 307 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 P0C879 139 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 HLA-GP17693 338 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 CCR6P51684 374 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 SUPT4H1P63272 117 aaKnown RBP11.73□□□□□ -0.53
GARNL3-204ENST00000429629 SSX9Q7RTT3 188 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 CENPSQ8N2Z9 138 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 ADAD2Q8NCV1 583 aaKnown RBP11.73□□□□□ -0.53
GARNL3-204ENST00000429629 SRSF12Q8WXF0 261 aaKnown RBP11.73□□□□□ -0.53
GARNL3-204ENST00000429629 RBPMSQ93062 196 aaKnown RBP11.73□□□□□ -0.53
GARNL3-204ENST00000429629 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-204ENST00000429629 FBXO7Q9Y3I1 522 aa11.73□□□□□ -0.53
GARNL3-204ENST00000429629 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 MSGN1A6NI15 193 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 AKR1C4P17516 323 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 PSMB8P28062 276 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 G6PCP35575 357 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM187Q14656 261 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 TNXAQ16473 311 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 SP6Q3SY56 376 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 TCTEX1D4Q5JR98 221 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 H2BFWTQ7Z2G1 175 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms