RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SPACA3Q8IXA5 215 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 ZNF525Q8N782 197 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 STXBP6Q8NFX7 210 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 OR51G1Q8NGK1 321 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 LRRC29Q8WV35 223 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 WDYHV1Q96HA8 205 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 SERTAD4Q9NUC0 356 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 YLPM1P49750 1951 aaKnown RBP6.79□□□□□ -1.32
HPS4-205ENST00000429411 FLNCQ14315 2725 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 A0A1W2PNU3 283 aaPredicted RBP6.79□□□□□ -1.32
HPS4-205ENST00000429411 ZNF83P51522 516 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 ZNF324BQ6AW86 544 aaPredicted RBP6.79□□□□□ -1.32
HPS4-205ENST00000429411 PCSK4Q6UW60 755 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 MRGPRGQ86SM5 289 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 OR10A7Q8NGE5 316 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 RNASE8Q8TDE3 154 aaKnown RBP6.79□□□□□ -1.32
HPS4-205ENST00000429411 ABHD17AQ96GS6 310 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 RAB9BQ9NP90 201 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 ODAMA1E959 279 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 C12orf77C9JDV5 145 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 C11orf94C9JXX5 98 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 PSPNO60542 156 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 MPV17P39210 176 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 THBS3P49746 956 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 COMPP49747 757 aaPredicted RBP6.78□□□□□ -1.32
HPS4-205ENST00000429411 TNFRSF9Q07011 255 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 TMEM178AQ8NBL3 297 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 WDR61Q9GZS3 305 aaKnown RBP6.78□□□□□ -1.32
HPS4-205ENST00000429411 TIMM8BQ9Y5J9 83 aaPredicted RBP6.78□□□□□ -1.32
HPS4-205ENST00000429411 TNCP24821 2201 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 HOXA5P20719 270 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 ATP5J2P56134 94 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 FAM201AQ5SY85 155 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 ASCL4Q6XD76 172 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 SLC35E3Q7Z769 313 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 PINX1Q96BK5 328 aaKnown RBP6.78□□□□□ -1.32
HPS4-205ENST00000429411 GPR87Q9BY21 358 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 PARLQ9H300 379 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 TUBA4BQ9H853 241 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 ITPR1Q14643 2758 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 MDFIC2A0A1B0GVS7 189 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 C17orf112F2Z3M2 114 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 UCP2P55851 309 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 RPL30P62888 115 aaKnown RBP6.78□□□□□ -1.32
HPS4-205ENST00000429411 COL10A1Q03692 680 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 PSG7Q13046 419 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 NAT8Q9UHE5 227 aa6.78□□□□□ -1.32
HPS4-205ENST00000429411 PIGBOS1A0A0B4J2F0 54 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A10PA6NDY2 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A18PA6NE21 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A16PA6NEW6 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A20PA6NIJ5 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A8PA6NJQ4 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A7PA6NKC0 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A22PA8MWA6 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A12PA8MX19 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A5PA8MXJ8 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A23PA8MXZ1 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 M0R1B8 84 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 SAP30O75446 220 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 NDUFB4O95168 129 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 IL18BPO95998 194 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 CRYABP02511 175 aaKnown RBP6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A15PP0C7V4 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A13PP0C7W8 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A14PP0C7W9 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 FAM90A24PP0C7X0 464 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 PAX6P26367 422 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 KCNIP4Q6PIL6 250 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 RPP25LQ8N5L8 163 aaKnown RBP6.77□□□□□ -1.33
HPS4-205ENST00000429411 KLF14Q8TD94 323 aaPredicted RBP6.77□□□□□ -1.33
HPS4-205ENST00000429411 R3HDM4Q96D70 268 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 TMEM147Q9BVK8 224 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 PLEKHA3Q9HB20 300 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 SETXQ7Z333 2677 aaKnown RBP6.77□□□□□ -1.33
HPS4-205ENST00000429411 DUXBA0A1W2PPF3 345 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 GYPAP02724 150 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 SLC35B1P78383 322 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 ACSM6Q6P461 480 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 ABHD12Q8N2K0 398 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 SPSB4Q96A44 273 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 SH2D2AQ9NP31 389 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 SIRT7Q9NRC8 400 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 METRNQ9UJH8 293 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
HPS4-205ENST00000429411 ACOT6Q3I5F7 207 aaPredicted RBP6.77□□□□□ -1.33
HPS4-205ENST00000429411 MOB1BQ7L9L4 216 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 ZNRF1Q8ND25 227 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 OR2T10Q8NGZ9 312 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 PGPEP1Q9NXJ5 209 aa6.77□□□□□ -1.33
HPS4-205ENST00000429411 ZGRF1Q86YA3 2104 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
HPS4-205ENST00000429411 KITLGP21583 273 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ID1P41134 155 aa6.76□□□□□ -1.33
HPS4-205ENST00000429411 ZNF726P1Q15940 193 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms