RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ASPHD2Q6ICH7 369 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 CACNG8Q8WXS5 425 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 SFRP2Q96HF1 295 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 IFI27L2Q9H2X8 130 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 PARLQ9H300 379 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 MIA3Q5JRA6 1907 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 C1QL1O75973 258 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 CHCHD2Q9Y6H1 151 aaPredicted RBP10.87□□□□□ -0.67
LDB3-205ENST00000429277 LY75O60449 1722 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 NPIPB9F8W1W9 429 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 NPIPB7O75200 414 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 LCN2P80188 198 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 TRGV3P03979 118 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 PRSS2P07478 247 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 SRIP30626 198 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 EGR4Q05215 589 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 LY6EQ16553 131 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 SPRED2Q7Z698 418 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 FAM57AQ8TBR7 257 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 RNASEH2CQ8TDP1 164 aaKnown RBP10.87□□□□□ -0.67
LDB3-205ENST00000429277 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 SSBP3Q9BWW4 388 aaPredicted RBP10.87□□□□□ -0.67
LDB3-205ENST00000429277 TRAV9-1A0A075B6T8 112 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 IGKV3D-11A0A0A0MRZ8 115 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 CGB1A6NKQ9 187 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 NPBWR2P48146 333 aa10.87□□□□□ -0.67
LDB3-205ENST00000429277 CEACAM4O75871 244 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 FDCSPQ8NFU4 85 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 SEC16AO15027 2179 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 H0YL77 283 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 ZNF708P17019 499 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 KLK2P20151 261 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 CSRP3P50461 194 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 TMEM190Q8WZ59 177 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 APC2O95996 2303 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
LDB3-205ENST00000429277 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 C1QTNF5Q9BXJ0 243 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 FOXJ2Q9P0K8 574 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 KLF4O43474 513 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 UCP1P25874 307 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 ASIPP42127 132 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 OR4D5Q8NGN0 318 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 RTN4RQ9BZR6 473 aa10.86□□□□□ -0.67
LDB3-205ENST00000429277 IGKV3D-15A0A087WSY6 115 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 OR11H12B2RN74 326 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 IGKV3-15P01624 115 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 C1QCP02747 245 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 PLP1P60201 277 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 OR11H2Q8NH07 326 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 ATP5LO75964 103 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 DNAL4O96015 105 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 IL6RP08887 468 aaPredicted RBP10.85□□□□□ -0.67
LDB3-205ENST00000429277 OR4X2Q8NGF9 303 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 MRAP2Q96G30 205 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 LINC00312Q9Y6C7 94 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 CECR9P0C854 216 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 PAX1P15863 534 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 MBNL2Q5VZF2 373 aaKnown RBP10.85□□□□□ -0.67
LDB3-205ENST00000429277 CYB5R2Q6BCY4 276 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 KBTBD11-OT1A0A1B0GTJ5 212 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
LDB3-205ENST00000429277 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
LDB3-205ENST00000429277 TMEM136Q6ZRR5 245 aa10.85□□□□□ -0.67
LDB3-205ENST00000429277 GHRHP01286 108 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
LDB3-205ENST00000429277 H2BFSP57053 126 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 TCF23Q7RTU1 214 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 WFDC6Q9BQY6 131 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 C21orf62Q9NYP8 219 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 NHLRC3Q5JS37 347 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 FMC1Q96HJ9 113 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 NPCDR1Q9BY65 106 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 TMEM74BQ9NUR3 256 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 UNC13CQ8NB66 2214 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 MPTX1A8MV57 137 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 EFEMP2O95967 443 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 REC114Q7Z4M0 266 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 TMEM183AQ8IXX5 376 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 CIARTQ8N365 385 aaPredicted RBP10.84□□□□□ -0.67
LDB3-205ENST00000429277 FAM131CQ96AQ9 280 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 TNFRSF18Q9Y5U5 241 aa10.84□□□□□ -0.67
LDB3-205ENST00000429277 TDRD15B5MCY1 1934 aaKnown RBP10.84□□□□□ -0.67
LDB3-205ENST00000429277 IQCF6A8MYZ5 107 aa10.83□□□□□ -0.67
LDB3-205ENST00000429277 REG1AP05451 166 aa10.83□□□□□ -0.67
LDB3-205ENST00000429277 SNRPCP09234 159 aaKnown RBP10.83□□□□□ -0.67
LDB3-205ENST00000429277 ACSF3Q4G176 576 aaPredicted RBP10.83□□□□□ -0.67
LDB3-205ENST00000429277 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 FOXI3A8MTJ6 420 aaPredicted RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 MTURNQ8N3F0 131 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms