RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 OR2A4O95047 310 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 IGLV2-23P01705 113 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 FAM157CP0CG43 387 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 F2RL1P55085 397 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 RRAS2P62070 204 aaPredicted RBP6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 GNB1P62873 340 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 EBI3Q14213 229 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 FCN2Q15485 313 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 POU2AF1Q16633 256 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 KRTAP21-3Q3LHN1 58 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 FAM219AQ8IW50 185 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR8H1Q8NGG4 311 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR5M8Q8NGP6 311 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR1S1Q8NH92 325 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 LSM10Q969L4 123 aaKnown RBP6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 RBM14Q96PK6 669 aaKnown RBP6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR2A7Q96R45 310 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 CLCC1Q96S66 551 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 RNF5Q99942 180 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 RASL11BQ9BPW5 248 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 PDCD10Q9BUL8 212 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 TMED3Q9Y3Q3 217 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 MMP24Q9Y5R2 645 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 POMT1Q9Y6A1 747 aa6.32□□□□□ -1.4
HMGA1P4-201ENST00000428643 DBX1A6NMT0 343 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 M0QZK8 103 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 ACTL6BO94805 426 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 NXPH3O95157 252 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 NDUFA3O95167 84 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 SIX6O95475 246 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 SCGB1D2O95969 90 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 SULT1A3P0DMM9 295 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 SULT1A4P0DMN0 295 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 HLA-GP17693 338 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 RPL8P62917 257 aaKnown RBP6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 C5orf64Q2M2E5 130 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 C2orf68Q2NKX9 166 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 IAH1Q2TAA2 248 aaPredicted RBP6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 NMSQ5H8A3 153 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 GSG1LQ6UXU4 331 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 TMEM86BQ8N661 226 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 NPBQ8NG41 125 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR4A16Q8NH70 328 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR4A5Q8NH83 315 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 TMEM167AQ8TBQ9 72 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 ABHD5Q8WTS1 349 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 GPR146Q96CH1 333 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 CHIAQ9BZP6 476 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 PRDM13Q9H4Q3 707 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 RANBP3Q9H6Z4 567 aaPredicted RBP6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 BET1LQ9NYM9 111 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 GSKIPQ9P0R6 139 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 PRNDQ9UKY0 176 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 NSG2Q9Y328 171 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 SIGLEC9Q9Y336 463 aa6.31□□□□□ -1.4
HMGA1P4-201ENST00000428643 NAV3Q8IVL0 2385 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 TRAV3A0A0B4J244 114 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 A0A1B0GU03 582 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 SH2D7A6NKC9 451 aaPredicted RBP6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 C15orf61A6NNL5 157 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 MPTX1A8MV57 137 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 UPK2O00526 184 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 FGF16O43320 207 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 GPR137BO60478 399 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 CNIH1O95406 144 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 CA2P00918 260 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR9G9P0C7N8 305 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 P0C879 139 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 CXCL3P19876 107 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 PJVKQ0ZLH3 352 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 TNXAQ16473 311 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 PRSS8Q16651 343 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 TUSC1Q2TAM9 212 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 C9orf152Q5JTZ5 239 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 C10orf55Q5SWW7 151 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 C16orf82Q7Z2V1 217 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 PPP1R27Q86WC6 154 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 FOXRED2Q8IWF2 684 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 MMD2Q8IY49 270 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 CADM3Q8N126 398 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 FAM71E2Q8N5Q1 922 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 C5orf56Q8N8D9 126 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 Q8N9W7 124 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 TEX45Q8NA69 505 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 ZBTB8BQ8NAP8 495 aaPredicted RBP6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR11H7Q8NGC8 314 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 GRPEL2Q8TAA5 225 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR10C1Q96KK4 312 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 HINT2Q9BX68 163 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 COMMD5Q9GZQ3 224 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 NPFFR1Q9GZQ6 430 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 ZNF430Q9H8G1 570 aaPredicted RBP6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 ESM1Q9NQ30 184 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 PLSCR3Q9NRY6 295 aa6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms