RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 AASSQ9UDR5 926 aa6.44□□□□□ -1.38
LSG1-202ENST00000427461 TMEM212A6NML5 194 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 KNCNA6PVL3 124 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 J3QRE1 110 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 CRTAPO75718 401 aaPredicted RBP6.43□□□□□ -1.38
LSG1-202ENST00000427461 FAM107AO95990 144 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 SPART-AS1P0CW21 52 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 PPP3R1P63098 170 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 CBX3Q13185 183 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 CDK10Q15131 360 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 RTL8BQ17RB0 113 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 KLK9Q2XQG4 91 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 FAM90A2PQ658T7 463 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 C6orf201Q7Z4U5 140 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 DHFR2Q86XF0 187 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 C15orf53Q8NAA6 179 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 OR2A7Q96R45 310 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 MRPL18Q9H0U6 180 aaKnown RBP6.43□□□□□ -1.38
LSG1-202ENST00000427461 CHMP1AQ9HD42 196 aaPredicted RBP6.43□□□□□ -1.38
LSG1-202ENST00000427461 PTTG2Q9NZH5 202 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 KLK9Q9UKQ9 250 aa6.43□□□□□ -1.38
LSG1-202ENST00000427461 IGKV1-6A0A0C4DH72 117 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 B2RBV5 119 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 K7EMT4 169 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 NDUFA4O00483 81 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 NAPSAO96009 420 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 SPP1P10451 314 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 DEFA4P12838 97 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 PRDX6P30041 224 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 RPL27AP46776 148 aaKnown RBP6.42□□□□□ -1.38
LSG1-202ENST00000427461 GTF2A1P52655 376 aaPredicted RBP6.42□□□□□ -1.38
LSG1-202ENST00000427461 TMEM41BQ5BJD5 291 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 AWAT2Q6E213 333 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 LHFPL3Q86UP9 236 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 ADGRG5Q8IZF4 528 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 VKORC1L1Q8N0U8 176 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 MFSD4AQ8N468 514 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 ZNF414Q96IQ9 312 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 NEDD4LQ96PU5 975 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 HDHD3Q9BSH5 251 aaPredicted RBP6.42□□□□□ -1.38
LSG1-202ENST00000427461 THTPAQ9BU02 230 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 OR2D2Q9H210 308 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 RDH8Q9NYR8 311 aa6.42□□□□□ -1.38
LSG1-202ENST00000427461 IGHV3-21A0A0B4J1V1 117 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 IGHV7-4-1A0A0J9YVY3 117 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 LINC00473A8K010 186 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 HMGB1P1B2RPK0 211 aaPredicted RBP6.41□□□□□ -1.38
LSG1-202ENST00000427461 RAB27BO00194 218 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 DHFRP00374 187 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 CD2P06729 351 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 CD3GP09693 182 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 ZNF735P0CB33 412 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
LSG1-202ENST00000427461 MAS1LP35410 378 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 POLR2IP36954 125 aaKnown RBP6.41□□□□□ -1.38
LSG1-202ENST00000427461 MNAT1P51948 309 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 HLA-DRB3P79483 266 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 PLA2G7Q13093 441 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 TCF24Q7RTU0 167 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 JAGN1Q8N5M9 183 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.41□□□□□ -1.38
LSG1-202ENST00000427461 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 OR6M1Q8NGM8 313 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 CANT1Q8WVQ1 401 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
LSG1-202ENST00000427461 TRAV8-7A0A075B6U6 113 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 CGB1A6NKQ9 187 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 C15orf62A8K5M9 175 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 CREBL2O60519 120 aaPredicted RBP6.4□□□□□ -1.38
LSG1-202ENST00000427461 RRASP10301 218 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 IGFBP3P17936 291 aaPredicted RBP6.4□□□□□ -1.38
LSG1-202ENST00000427461 PTBP1P26599 531 aaKnown RBP eCLIP6.4□□□□□ -1.38
LSG1-202ENST00000427461 PSMD7P51665 324 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 ID3Q02535 119 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 TMED1Q13445 227 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 IRF3Q14653 427 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 FAM222AQ5U5X8 452 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 XAF1Q6GPH4 301 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 OR10K2Q6IF99 312 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 LILRB2Q8N423 598 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 ACBD7Q8N6N7 88 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 OSR1Q8TAX0 266 aaPredicted RBP6.4□□□□□ -1.38
LSG1-202ENST00000427461 GPR148Q8TDV2 347 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 DNAJC9Q8WXX5 260 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 CMTM3Q96MX0 182 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 MS4A6AQ9H2W1 248 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 SMPD3Q9NY59 655 aaPredicted RBP6.4□□□□□ -1.38
LSG1-202ENST00000427461 DKK2Q9UBU2 259 aa6.4□□□□□ -1.38
LSG1-202ENST00000427461 DNASE2O00115 360 aaPredicted RBP6.39□□□□□ -1.39
LSG1-202ENST00000427461 DFFBO76075 338 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 DUTP33316 252 aaKnown RBP6.39□□□□□ -1.39
LSG1-202ENST00000427461 PAFAH1B2P68402 229 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 OR2G6Q5TZ20 316 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 UBE2UQ5VVX9 321 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 RFKQ969G6 155 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 DCUN1D5Q9BTE7 237 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 OR51E2Q9H255 320 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 Q9H8V8 135 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms