RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 DEDD2Q8WXF8 326 aa5.84□□□□□ -1.47
LINC01049-201ENST00000426840 S100ZQ8WXG8 99 aa5.84□□□□□ -1.47
LINC01049-201ENST00000426840 ZNF486Q96H40 463 aaPredicted RBP5.84□□□□□ -1.47
LINC01049-201ENST00000426840 HARBI1Q96MB7 349 aa5.84□□□□□ -1.47
LINC01049-201ENST00000426840 PRRT1Q99946 306 aa5.84□□□□□ -1.47
LINC01049-201ENST00000426840 KIAA1456Q9P272 454 aa5.84□□□□□ -1.47
LINC01049-201ENST00000426840 METTL1Q9UBP6 276 aaKnown RBP5.84□□□□□ -1.47
LINC01049-201ENST00000426840 X6R8D5 127 aa5.84□□□□□ -1.47
LINC01049-201ENST00000426840 MPPED1O15442 326 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 HPRT1P00492 218 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 RLN1P04808 185 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 CD40LGP29965 261 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 FAUP35544 74 aaKnown RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 LPAR6P43657 344 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 VDAC2P45880 294 aaPredicted RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 PIGPP57054 158 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 UBE2KP61086 200 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 SSBP2P81877 361 aaPredicted RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 PJVKQ0ZLH3 352 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 CBX3Q13185 183 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 SURF2Q15527 256 aaPredicted RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 POU2AF1Q16633 256 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 ZNF562Q6V9R5 426 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 IDO2Q6ZQW0 420 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 SLC35E3Q7Z769 313 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 PPP1R27Q86WC6 154 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 PUSL1Q8N0Z8 303 aaKnown RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 TCTEX1D1Q8N7M0 179 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 OR4S2Q8NH73 311 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 CD300LFQ8TDQ1 290 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 NOL4LQ96MY1 436 aaPredicted RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 CLCC1Q96S66 551 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 OR51J1Q9H342 316 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 C5orf66Q9H5L9 145 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 PLEKHA2Q9HB19 425 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 SLC2A9Q9NRM0 540 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 FAM212BQ9NTI7 297 aaPredicted RBP5.83□□□□□ -1.48
LINC01049-201ENST00000426840 MCUBQ9NWR8 336 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 LINC00527Q9UJ94 153 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 SCP2D1Q9UJQ7 156 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 NUBP2Q9Y5Y2 271 aa5.83□□□□□ -1.48
LINC01049-201ENST00000426840 LINC00854A0A1B0GVQ3 168 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 ARPC1BO15143 372 aaKnown RBP5.82□□□□□ -1.48
LINC01049-201ENST00000426840 KCNAB3O43448 404 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 S1PR2O95136 353 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 HRASP01112 189 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 IGKV1-39P01597 117 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 IGKV1D-39P04432 117 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 IGF1P05019 195 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 SAA1P0DJI8 122 aaPredicted RBP5.82□□□□□ -1.48
LINC01049-201ENST00000426840 S100GP29377 79 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 INPP1P49441 399 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 CRIP2P52943 208 aaPredicted RBP5.82□□□□□ -1.48
LINC01049-201ENST00000426840 NDPQ00604 133 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 ZNF846Q147U1 533 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 PRSS8Q16651 343 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 VMA21Q3ZAQ7 101 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 C19orf54Q5BKX5 351 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 TRIQKQ629K1 86 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 C10orf99Q6UWK7 81 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 ETV3LQ6ZN32 361 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 CENPVQ7Z7K6 275 aaPredicted RBP5.82□□□□□ -1.48
LINC01049-201ENST00000426840 VKORC1L1Q8N0U8 176 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 CADM3Q8N126 398 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 Q8N1Y9 231 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 STPG2Q8N412 459 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 KLHDC1Q8N7A1 406 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 C3orf56Q8N813 242 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 ADAD2Q8NCV1 583 aaKnown RBP5.82□□□□□ -1.48
LINC01049-201ENST00000426840 TMEM167AQ8TBQ9 72 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 TMEM230Q96A57 120 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 TP53RKQ96S44 253 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 CITED1Q99966 193 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 CCDC32Q9BV29 185 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 CDIP1Q9H305 208 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 ZNF580Q9UK33 172 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 VSIG4Q9Y279 399 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 FBXO7Q9Y3I1 522 aa5.82□□□□□ -1.48
LINC01049-201ENST00000426840 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 TRAV3A0A0B4J244 114 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 TEX13DA0A0J9YY54 714 aaPredicted RBP5.81□□□□□ -1.48
LINC01049-201ENST00000426840 C3orf85A0A1B0GTC6 90 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 NAP1L6A6NFF2 107 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 CRYM-AS1A6NIL9 109 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 G3V318 75 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 AP4M1O00189 453 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 ATP6V0E1O15342 81 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 OR2A4O95047 310 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 CA2P00918 260 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 NQO2P16083 231 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 PPIFP30405 207 aaKnown RBP5.81□□□□□ -1.48
LINC01049-201ENST00000426840 BTCP35070 178 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 CCR6P51684 374 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 TAS2R31P59538 309 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 IFITM3Q01628 133 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 CFHR3Q02985 330 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 FXYD3Q14802 87 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 PLGLAQ15195 96 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 SP6Q3SY56 376 aa5.81□□□□□ -1.48
LINC01049-201ENST00000426840 TCTEX1D4Q5JR98 221 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms