RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TSNAXQ99598 290 aaKnown RBP9.86□□□□□ -0.83
GPC1-204ENST00000426280 FCGR3BO75015 233 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 CRYZL1O95825 349 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 PI3P19957 117 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 TBPP20226 339 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 SLC6A1P30531 599 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 PPP5CP53041 499 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 SLURP1P55000 103 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 KLF9Q13886 244 aaPredicted RBP9.85□□□□□ -0.83
GPC1-204ENST00000426280 PHLDA2Q53GA4 152 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 TMEM65Q6PI78 240 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 REC114Q7Z4M0 266 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 ARRDC1Q8N5I2 433 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 DCUN1D4Q92564 292 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 ADTRPQ96IZ2 230 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 HARBI1Q96MB7 349 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 HSD17B10Q99714 261 aaKnown RBP9.85□□□□□ -0.83
GPC1-204ENST00000426280 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 PTTG2Q9NZH5 202 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 FOXA2Q9Y261 457 aaPredicted RBP9.85□□□□□ -0.83
GPC1-204ENST00000426280 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
GPC1-204ENST00000426280 IGHV4OR15-8A0A075B7B6 117 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 A0A087WW49 117 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 SHOXO15266 292 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 PGLYRP1O75594 196 aaPredicted RBP9.84□□□□□ -0.83
GPC1-204ENST00000426280 SPDEFO95238 335 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 PGAM2P15259 253 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 RUNX1Q01196 453 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 AKIRIN2Q53H80 203 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 ZNF66Q6ZN08 573 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 VKORC1L1Q8N0U8 176 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 ZBTB34Q8NCN2 500 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 OR51H1Q8NH63 302 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 ARPC1AQ92747 370 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 DLX4Q92988 240 aaPredicted RBP9.84□□□□□ -0.83
GPC1-204ENST00000426280 RHOVQ96L33 236 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 RSRP1Q9BUV0 290 aa9.84□□□□□ -0.83
GPC1-204ENST00000426280 LINC00854A0A1B0GVQ3 168 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 DISC1C4P0D8 188 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 E7EUB6 86 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 GPR31O00270 319 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 RAMP3O60896 148 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 DUS4LO95620 317 aaKnown RBP9.83□□□□□ -0.84
GPC1-204ENST00000426280 RLN1P04808 185 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 MYOD1P15172 320 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 LGALS7P47929 136 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 UCP3P55916 312 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 ZNF45Q02386 682 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 MEF2DQ14814 521 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 MSMO1Q15800 293 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 RTL8BQ17RB0 113 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 C10orf55Q5SWW7 151 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 ZNF57Q68EA5 555 aaPredicted RBP9.83□□□□□ -0.84
GPC1-204ENST00000426280 TOMM5Q8N4H5 51 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 GDPD1Q8N9F7 314 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 OR51S1Q8NGJ8 323 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 OR13C8Q8NGS7 320 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 TERB2Q8NHR7 220 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 MARCH1Q8TCQ1 289 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 HRASLSQ9HDD0 168 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 MCUBQ9NWR8 336 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 PRELID3BQ9Y3B1 194 aa9.83□□□□□ -0.84
GPC1-204ENST00000426280 A0A1B0GW64 132 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 MSGN1A6NI15 193 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 SEC14L6B5MCN3 397 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 CNIH1O95406 144 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 SAA1P0DJI8 122 aaPredicted RBP9.82□□□□□ -0.84
GPC1-204ENST00000426280 RRASP10301 218 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 UBE2KP61086 200 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 ZNF616Q08AN1 781 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 TMEM267Q0VDI3 215 aaPredicted RBP9.82□□□□□ -0.84
GPC1-204ENST00000426280 PRSS8Q16651 343 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 DEFB121Q5J5C9 76 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 C19orf35Q6ZS72 473 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 SLC38A6Q8IZM9 456 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 SPAG16Q8N0X2 631 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 TEX45Q8NA69 505 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 OR5M8Q8NGP6 311 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 PRR25Q96S07 402 aa9.82□□□□□ -0.84
GPC1-204ENST00000426280 ZNF430Q9H8G1 570 aaPredicted RBP9.82□□□□□ -0.84
GPC1-204ENST00000426280 PRH1P02810 166 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 TRGV3P03979 118 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 LGALS1P09382 135 aaKnown RBP9.81□□□□□ -0.84
GPC1-204ENST00000426280 IL7P13232 177 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 TPPP2P59282 170 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 CATR1Q13166 79 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 CBX3Q13185 183 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 TRIQKQ629K1 86 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 LPCAT3Q6P1A2 487 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 TBC1D26Q86UD7 250 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 OR4S2Q8NH73 311 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 MCRIP2Q9BUT9 160 aaKnown RBP9.81□□□□□ -0.84
GPC1-204ENST00000426280 SLC2A9Q9NRM0 540 aa9.81□□□□□ -0.84
GPC1-204ENST00000426280 S1PR2O95136 353 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 TRBV12-3P01733 135 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 RPA2P15927 270 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 INPP1P49441 399 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 PIGPP57054 158 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms