RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 HIST2H2BCQ6DN03 193 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 HSD17B13Q7Z5P4 300 aaPredicted RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 PUSL1Q8N0Z8 303 aaKnown RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 GNPNAT1Q96EK6 184 aaPredicted RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 CLCC1Q96S66 551 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 PARD6GQ9BYG4 376 aaPredicted RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 REG4Q9BYZ8 158 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 NARFLQ9H6Q4 476 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 SRRM4A7MD48 611 aaKnown RBP11.69□□□□□ -0.54
CDK3-201ENST00000425876 H7C2Y5 167 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 UPK2O00526 184 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 ENSAO43768 121 aaKnown RBP11.69□□□□□ -0.54
CDK3-201ENST00000425876 IFNA5P01569 189 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
CDK3-201ENST00000425876 REG1BP48304 166 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 RPP30P78346 268 aaKnown RBP11.69□□□□□ -0.54
CDK3-201ENST00000425876 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 ATP6V1FQ16864 119 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 HAPLN4Q86UW8 402 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 ZNF525Q8N782 197 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 OR4A5Q8NH83 315 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 OR4C12Q96R67 309 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 FKBP11Q9NYL4 201 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 NUP50Q9UKX7 468 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 TCF19Q9Y242 345 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 KPTNQ9Y664 436 aa11.69□□□□□ -0.54
CDK3-201ENST00000425876 CYSRT1A8MQ03 144 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 ZNF705EA8MWA4 302 aaPredicted RBP11.68□□□□□ -0.54
CDK3-201ENST00000425876 NUDT19A8MXV4 375 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 LY6LH3BQJ8 138 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 FGF2P09038 288 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 OR8U8P0C7N1 319 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 LMO4P61968 165 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 ARF6P62330 175 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 ARL16Q0P5N6 197 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 AANATQ16613 207 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 HSD17B11Q8NBQ5 300 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 VSTM2AQ8TAG5 236 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 PINX1Q96BK5 328 aaKnown RBP11.68□□□□□ -0.54
CDK3-201ENST00000425876 BPESC1Q9GZL8 116 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 PLA2G2EQ9NZK7 142 aa11.68□□□□□ -0.54
CDK3-201ENST00000425876 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 TRIM77I1YAP6 450 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 NDUFS8O00217 210 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 KBTBD11O94819 623 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 SAA1P0DJI8 122 aaPredicted RBP11.67□□□□□ -0.54
CDK3-201ENST00000425876 COL8A1P27658 744 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 LGALS7P47929 136 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 PAX2Q02962 417 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 SLC38A11Q08AI6 406 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 PNKDQ8N490 385 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 CLDND2Q8NHS1 167 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 PARP11Q9NR21 331 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 COX6B1P14854 86 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
CDK3-201ENST00000425876 COX7A1P24310 79 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
CDK3-201ENST00000425876 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 OR10P1Q8NGE3 313 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 OR5B3Q8NH48 314 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 TMEM167AQ8TBQ9 72 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
CDK3-201ENST00000425876 HEYLQ9NQ87 328 aaPredicted RBP11.67□□□□□ -0.54
CDK3-201ENST00000425876 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 INSIG2Q9Y5U4 225 aa11.67□□□□□ -0.54
CDK3-201ENST00000425876 AKAP6Q13023 2319 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 C15orf62A8K5M9 175 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 ODF3BA8MYP8 253 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 PAX1P15863 534 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 HTR1DP28221 377 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 DLX1P56177 255 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 ATP5IP56385 69 aaPredicted RBP11.66□□□□□ -0.54
CDK3-201ENST00000425876 RPS16P62249 146 aaKnown RBP11.66□□□□□ -0.54
CDK3-201ENST00000425876 LRRC75BQ2VPJ9 315 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 LYPD6BQ8NI32 183 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 SCGB1C1Q8TD33 95 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 MARC2Q969Z3 335 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 RPEQ96AT9 228 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 DPM3Q9P2X0 92 aa11.66□□□□□ -0.54
CDK3-201ENST00000425876 POLR3KQ9Y2Y1 108 aaPredicted RBP11.66□□□□□ -0.54
CDK3-201ENST00000425876 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
CDK3-201ENST00000425876 FOXH1O75593 365 aa11.65□□□□□ -0.54
CDK3-201ENST00000425876 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
CDK3-201ENST00000425876 CEACAM3P40198 252 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms