RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CYSLTR1Q9Y271 337 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 HS3ST2Q9Y278 367 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 COQ4Q9Y3A0 265 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 AMMECR1Q9Y4X0 333 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF706Q9Y5V0 76 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 RB1CC1Q8TDY2 1594 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 BAZ2AQ9UIF9 1905 aaKnown RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 MYH15Q9Y2K3 1946 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 YLPM1P49750 1951 aaKnown RBP2.69□□□□□ -1.98
SF3B1-205ENST00000424674 TRBV20OR9-2A0A075B6H5 130 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 TRAV38-1A0A0B4J264 116 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 LOC102725191A0A1B0GVB3 256 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 A0A1B0GW54 56 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 TNFSF13O75888 250 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 IGLV2-8P01709 118 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 PATE4P0C8F1 98 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 DEFA3P59666 94 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 MAXP61244 160 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 RPS11P62280 158 aaKnown RBP eCLIP2.69□□□□□ -1.98
SF3B1-205ENST00000424674 GNB1P62873 340 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 HBA1P69905 142 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 EIF3IQ13347 325 aaKnown RBP2.69□□□□□ -1.98
SF3B1-205ENST00000424674 FKBP1CQ5VVH2 108 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 WDR59Q6PJI9 974 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 LYPD2Q6UXB3 125 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 WDR86Q86TI4 376 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 LINC01551Q86U37 167 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 C1orf174Q8IYL3 243 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 ZDHHC22Q8N966 263 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 OR4C16Q8NGL9 310 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 FAM57AQ8TBR7 257 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 SLAMF6Q96DU3 332 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 RMI2Q96E14 147 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 SPIN2AQ99865 258 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 SPIN2BQ9BPZ2 258 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 C11orf68Q9H3H3 251 aaKnown RBP2.69□□□□□ -1.98
SF3B1-205ENST00000424674 HEXA-AS1Q9H8Q6 139 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 RNF122Q9H9V4 155 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 ZFP30Q9Y2G7 519 aa2.69□□□□□ -1.98
SF3B1-205ENST00000424674 OVOS2A0A0G2JMS6 1433 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 THSD7BQ9C0I4 1608 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 SIGLEC1Q9BZZ2 1709 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ITGB4P16144 1822 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 MYH2Q9UKX2 1941 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 IGLV1-50A0A075B6I6 118 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 LOC102724200A0A096LPH7 203 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 IGKV6D-21A0A0A0MT36 114 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 IGHV1OR15-9A0A0B4J2B8 117 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 TRDV1A0A1B0GX56 115 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 MEIS3P1A6NDR6 274 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 DPRXA6NFQ7 191 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 A8MUN3 132 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 BMPR1BO00238 502 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 LST1O00453 97 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 SOCS3O14543 225 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 COX7A2LO14548 114 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 UBE2L6O14933 153 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 BCL2L11O43521 198 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 SCO1O75880 301 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 IGHV3-11P01762 117 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 MAS1P04201 325 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF705DP0CH99 300 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 CRISP2P16562 243 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 AZU1P20160 251 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 FGF7P21781 194 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 RBMXP38159 391 aaKnown RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 CXCL12P48061 93 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 LINC01547P58512 204 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 LINC00313P59037 77 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 COPZ1P61923 177 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 PKIAP61925 76 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 TIMM10P62072 90 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 FKBP1AP62942 108 aaKnown RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ATP5G2Q06055 141 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 RTL8BQ17RB0 113 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 TMEM241Q24JQ0 296 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF876PQ49A33 203 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 MPV17L2Q567V2 206 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 HRCT1Q6UXD1 115 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 UNQ9165/PRO28630Q6UXU0 137 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 PDPNQ86YL7 162 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF709Q8N972 641 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF721Q8TF20 911 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF418Q8TF45 676 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 MAGOHBQ96A72 148 aaKnown RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 CMBLQ96DG6 245 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 TEX37Q96LM6 180 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 AP1S3Q96PC3 154 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ERMAPQ96PL5 475 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 SLC25A21Q9BQT8 299 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 TM2D3Q9BRN9 247 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 PSMG3Q9BT73 122 aaPredicted RBP2.68□□□□□ -1.98
SF3B1-205ENST00000424674 AICDAQ9GZX7 198 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 OR5AC2Q9NZP5 309 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF492Q9P255 531 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 NAT8Q9UHE5 227 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 PCTPQ9UKL6 214 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 HECW2Q9P2P5 1572 aa2.68□□□□□ -1.98
SF3B1-205ENST00000424674 C2orf16Q68DN1 1984 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms